Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0802 ATGGCGCAGTTACCTCCTAAGATACCCATCATGGCCCAGAATTGGCCATCGTTTCCTCACAACCAAAAGTTACCCACAATGCCGCCGGCCGGTTTCAATAATCCCACGACTCAACAGTTTCAGCAACAGAACTCGTCGCCGCCAACTTGGGTGGATGAGTTTCTTGACTTCTCTTCGGCACGGCGGGGGCATCACCGGCGGTCTGCTAGCGACTCCATCGCCTACCTCGACACGGCATTTCTCGAGGAATGTCGGAACCCGGTGGCCGGATCATCAGCCTATCATCATCATGGGTTTGATAGGCTTGACGATGACCAGCTCATGTCCATGTTCTCCGATGACATTGGCTCGGTTTCATTGCCGCCGTCATCTGCCGCCACTGCATCGAACCCGTCTACGCCCTCCGATGACCAGAATAGCAATAACGAGGAGAAGCCTATGGTGATTGACGACGTCTTTGTTCCGAGACAAGATCTTCAATTCCAGAAGCATCTCAAGAATGACCCTGGGGAGGTGGAGAGCGCATGCAATAATGAGAGTGAAACTTTTCCTCCGCCGCCGCCGCCGCCCTCCATGGTAGGCGGTGGCTGCGAAAATGTCGTTGATCCCAAAAGAGTTAAGAGAATTTTGGCTAATCGGCAGTCAGCTCAGAGATCCAGGGTGAGAAAGCTGCAATACATTTCTGATTTAGAAAGAAGCGTATCAACTTTGCAGACGGAGGTATCAGCATTGTCGCCAAGGGTAGCATTCTTGGACCACCAACGTCTGATTCTCAACGGAGACAATAGTACCTTAAAACAACGTATTGCTGCTTTGGCTCAAGACAAGATTTTCAAAGACGCTCACCACGAAGCATTAAAGAGGGAAATAGAAAGACTCGGACAAATCTATCAGCAGCAACAAAACTTGCAGAAGATGGAAAACTCAGCATCAGCAAACGATAATGGTAATAATAATAACGGCCATCTGCTTCACTCTCCGGCGCAGCCACAGCAACCACCACTAATGCCACCGCAGTCTCAGCCCATGGGATGTTTGGACAAGGAACAGCTTATGAGTTGA 1062 0.5019 MAQLPPKIPIMAQNWPSFPHNQKLPTMPPAGFNNPTTQQFQQQNSSPPTWVDEFLDFSSARRGHHRRSASDSIAYLDTAFLEECRNPVAGSSAYHHHGFDRLDDDQLMSMFSDDIGSVSLPPSSAATASNPSTPSDDQNSNNEEKPMVIDDVFVPRQDLQFQKHLKNDPGEVESACNNESETFPPPPPPPSMVGGGCENVVDPKRVKRILANRQSAQRSRVRKLQYISDLERSVSTLQTEVSALSPRVAFLDHQRLILNGDNSTLKQRIAALAQDKIFKDAHHEALKREIERLGQIYQQQQNLQKMENSASANDNGNNNNGHLLHSPAQPQQPPLMPPQSQPMGCLDKEQLMS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0802 353 MobiDBLite consensus disorder prediction 12 48 - -
Lele29g0802 353 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 202 265 IPR004827 GO:0003700|GO:0006355
Lele29g0802 353 Coils Coil 283 303 - -
Lele29g0802 353 Pfam bZIP transcription factor 204 248 IPR004827 GO:0003700|GO:0006355
Lele29g0802 353 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 207 222 IPR004827 GO:0003700|GO:0006355
Lele29g0802 353 MobiDBLite consensus disorder prediction 15 48 - -
Lele29g0802 353 MobiDBLite consensus disorder prediction 300 327 - -
Lele29g0802 353 FunFam Transcription factor VIP1 203 274 - -
Lele29g0802 353 SMART brlzneu 200 264 IPR004827 GO:0003700|GO:0006355
Lele29g0802 353 MobiDBLite consensus disorder prediction 113 142 - -
Lele29g0802 353 MobiDBLite consensus disorder prediction 113 143 - -
Lele29g0802 353 CDD bZIP_plant_RF2 205 255 IPR044759 GO:0003700|GO:0006355
Lele29g0802 353 SUPERFAMILY Leucine zipper domain 204 258 IPR046347 GO:0003700|GO:0006355
Lele29g0802 353 PANTHER BASIC LEUCINE ZIPPER 34 1 327 - -
Lele29g0802 353 MobiDBLite consensus disorder prediction 300 353 - -
Lele29g0802 353 Gene3D - 203 274 - -
Lele29g0802 353 MobiDBLite consensus disorder prediction 169 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0802 Lele-ChrLele29 5258013 5259843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0802 1 282 bZIP Transcription Factor Family AT3G58120 50.993 2.24e-76 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele29g0802 bZIP_1 1.4e-09 CL0018