Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0790 ATGGCTCCTAGGGATAGACCCGCTTCTATCGTCGCCTCTAATCCATCCGACCCTGCCAAGGAGATCCGATACCGAGGTGTCCGCAAGAGGCCATGGGGGCGTTACGCAGCCGAGATTCGTGATCCCGGCAAGAAAACCCGTGTTTGGCTTGGAACTTTTGATACCGCTGAGGAGGCGGCGCGTGCTTACGACTCGGCGGCCAGGGATTTCCGTGGCGCTAAGGCCAAGACTAACTTCCCGGCTCCCTCTGAACTTCCCAACAACAACTTCAGTCGCAGCCCTAGCCAGAGCAGCACACTTGAGTCATCATCGCCGCCGCCAGCTGCTCCTCCTCCGCTAGAACTCTCCCTTGGGTCACTCAATTCCGGCGGCGGCGCGTTGGGATTCCAGGTTATTCCGGTGGCTCGCCCGGTGAAGTTTTTTGACGCGTTCGCTCGGGCGGACAGCATGATGGCAGCTGCCGCCGGCCGCCGTGAGATGTGCTGGTTTAATAGGCCAGTTGTGGAGTTCCGCGGCTCCGTCATCGTCAGAGATGGTGGTGGCCACAGTGACTCTGATTCGTCCTCCGTCGTGGACTACGAGCGTGCTTCGCCTCGTACAGTTTTAGATCTTGACCTGAACGTTCCTCCGCCGGCGGAAGTCGCCTGA 648 0.5972 MAPRDRPASIVASNPSDPAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDSAARDFRGAKAKTNFPAPSELPNNNFSRSPSQSSTLESSSPPPAAPPPLELSLGSLNSGGGALGFQVIPVARPVKFFDAFARADSMMAAAAGRREMCWFNRPVVEFRGSVIVRDGGGHSDSDSSSVVDYERASPRTVLDLDLNVPPPAEVA 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0790 215 Gene3D AP2/ERF domain 22 81 IPR036955 GO:0003700|GO:0006355
Lele29g0790 215 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 16 187 - -
Lele29g0790 215 SMART rav1_2 23 86 IPR001471 GO:0003700|GO:0006355
Lele29g0790 215 MobiDBLite consensus disorder prediction 81 103 - -
Lele29g0790 215 ProSiteProfiles AP2/ERF domain profile. 23 80 IPR001471 GO:0003700|GO:0006355
Lele29g0790 215 PRINTS Ethylene responsive element binding protein signature 46 62 IPR001471 GO:0003700|GO:0006355
Lele29g0790 215 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Lele29g0790 215 MobiDBLite consensus disorder prediction 1 27 - -
Lele29g0790 215 FunFam Ethylene-responsive transcription factor 2 23 81 - -
Lele29g0790 215 MobiDBLite consensus disorder prediction 74 117 - -
Lele29g0790 215 CDD AP2 23 81 IPR001471 GO:0003700|GO:0006355
Lele29g0790 215 Pfam AP2 domain 23 72 IPR001471 GO:0003700|GO:0006355
Lele29g0790 215 SUPERFAMILY DNA-binding domain 23 81 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0790 Lele-ChrLele29 5144185 5144832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0790 6 142 AP2-EREBP Transcription Factor Family AT3G15210 64.000 1.77e-51 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele29g0790 AP2 1.3e-14 CL0081