Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0786 ATGGCTGATGCAGCGGGTCTAGCTGAGGCAGCAGGATCAAGATTTACTTCCTTGGAGCTTATTGGACAAGGTTCATTTGGTGATGTCTATAAAGCTTATATGTTGTGCTTCCTTATTTTCAGGTTTGACAAGGAGCTCAACAAACAGGTTGCTATCAAAGTGATTGATTTGGATGAATCGGAGGATGAGATTGATGACATTCAGACGGAAATTGCTGTTCTATCACAATGCCGTTGTCCATATATTACCGAGTATTATGGCTCCTATCTCCATCAAACTAAACTTTTTATAATAATGGAGTACATGGCTGGAGGCTCTGTAGCTGACGTACTCCAATCAGGTCATCCCCTTGATGAAGTGTCAATCGCTTGCATTCTACGTGACATGTTGCATGCTATTGATTATTTGCATGCTGAAGGAAAAATTCATAGAGACATCAAAGCAGCAAACATTTTATTGTCTGAGAATGGTGATGTTAAGGTTGCAGATTTTGGTGTTTCTGCGCAGCTAACTAGGACCATATCAAGGAGAAAGACATTTGTAGGAACACCATTCTGGATGGCACCTGAGGTTATTCAGACTGCAGAAGGATATAATGAGAAGGCAGATATCTGGTCTCTGGGGATCACAACAATTGAGATGGCAAAAGGGGAGCCTCCACTTAGTGACCTTCATCCTATGAGAGTGCTTTTCATCATACCCCGTGAGAACCCACCACAGCTAGATGAACATTTTTCTCGGCCCATTAAAGAATTTGTCTTGTTGTGTTTAAGAAAGCTTACAGCAGAGGCAAGGGTCTATGCCATTCCTACTCTTACTGCTGGTTCAATTTCTTTTTTTTTTAGCACAAGTTATGTTGAGTTTATGTTTTGTCCGAACTTCAAGTCCAGTGGGTTTTCATCTGAGGAGAGGCCAAGTGCTAAGGAACTTCTCAAACATCGTTTTATTCGAACTGCTAGAAAGAGTCCAAAGCTTTTGGAAAGAATAAGGGAGCGTCCCAAGTATCAAATAAAAGAAGTGGGGACACCTAGAAGTGGTCCAAGAGGGATAGGGGAGCCATCTGATACGATGAAAGTGGCAAGATATTTAAGAGAAGAAGCTACTCAAACCATTCGCAGTGGTCAGGATAAAACCCTGAAAAATTCTGGATGGGACTTCAGCATTGGTGGATCAGAGGGTACTGGAACTTTTCGCAGTGTTGCACGACCGCCTCAGCATAGAGATAAGAAAACAGATGTTCCACAATATCAACTTGATCAAAAGAAGGCCACACAGAGTGGCTATCTTGGGGCATCTTCCTATAAAAGTTCTCTCAATGAATCACCAGAAACTTCCCTTGAAGATTATGAATTGTCTGGGAGTGGATCGGGAACTGTTGTTATTCGATCTCCAAAAGGATCACAATCATCAATCCTTCATGACCAAAGCTCCCTGTCTAGCAGTAGCTATGCTTCTTTTGAAGATAATTCTTCCAGTGGAACTATTGTTGTCCGTGGTCAGCATGATGATTATGACTCTTCACAGACAGCGAGGTCAAGGCTGGGACTGAATGAGAGAACTGCAAATGCCTCACTTGAAGATAGTGCCTCAAATCTTGCAGAGGCAAAGGCTGCTATGCTAAGACCAAGGAAAGGAAATACTCGAGAGAGAGTTGCACATGGAAAGACCAGCAATGATGTGCATGAAAGCAGAAGAGACCAAGTGACAAGCAGCTCCGATTTCTCAAGAGCATCTCGTCTAAACAATGGTCCCCAACAAGGAATTTCAAGACTGCGCCATACTGATGATGATCAAGACAATGGCAGAATGTTGTCACCCTCGGTGGCATTATCTGTTTTACTTATTCCTTCTTTAAAAGAGGCCTTTGCTGATGATCCAGAAAGGTCTGCCATACAAGAAATAATCGATTCACTCAAACACATGGAGCAGATAAAGTCTGGATCATGTGATGCTCTTGTCAAAAAGTTACTTCAGCGATTGGCAAGTTCGGAGGAATCTTCGTTGAAGGATCTGCAGGAGCAAGCAGCTCAATTATTCACCAAGACCAAGTCAGCTCCTGAAGAACCCCAATATGCAACTACAGAAGTTGATGCCAGGAAGAAACAACAGAACAGAGAACTTCATTCAAATAGCAATCTAGGCCCTCTTGCAAGATTTCTTCTCTCAAGATGGCAAAGTCAAGCCTAA 2187 0.4252 MADAAGLAEAAGSRFTSLELIGQGSFGDVYKAYMLCFLIFRFDKELNKQVAIKVIDLDESEDEIDDIQTEIAVLSQCRCPYITEYYGSYLHQTKLFIIMEYMAGGSVADVLQSGHPLDEVSIACILRDMLHAIDYLHAEGKIHRDIKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQTAEGYNEKADIWSLGITTIEMAKGEPPLSDLHPMRVLFIIPRENPPQLDEHFSRPIKEFVLLCLRKLTAEARVYAIPTLTAGSISFFFSTSYVEFMFCPNFKSSGFSSEERPSAKELLKHRFIRTARKSPKLLERIRERPKYQIKEVGTPRSGPRGIGEPSDTMKVARYLREEATQTIRSGQDKTLKNSGWDFSIGGSEGTGTFRSVARPPQHRDKKTDVPQYQLDQKKATQSGYLGASSYKSSLNESPETSLEDYELSGSGSGTVVIRSPKGSQSSILHDQSSLSSSSYASFEDNSSSGTIVVRGQHDDYDSSQTARSRLGLNERTANASLEDSASNLAEAKAAMLRPRKGNTRERVAHGKTSNDVHESRRDQVTSSSDFSRASRLNNGPQQGISRLRHTDDDQDNGRMLSPSVALSVLLIPSLKEAFADDPERSAIQEIIDSLKHMEQIKSGSCDALVKKLLQRLASSEESSLKDLQEQAAQLFTKTKSAPEEPQYATTEVDARKKQQNRELHSNSNLGPLARFLLSRWQSQA 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0786 728 MobiDBLite consensus disorder prediction 417 529 - -
Lele29g0786 728 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 10 681 - -
Lele29g0786 728 SMART serkin_6 15 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g0786 728 Gene3D Transferase(Phosphotransferase) domain 1 12 278 - -
Lele29g0786 728 ProSiteProfiles Protein kinase domain profile. 15 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g0786 728 MobiDBLite consensus disorder prediction 402 416 - -
Lele29g0786 728 MobiDBLite consensus disorder prediction 541 569 - -
Lele29g0786 728 MobiDBLite consensus disorder prediction 679 711 - -
Lele29g0786 728 MobiDBLite consensus disorder prediction 371 394 - -
Lele29g0786 728 SUPERFAMILY Protein kinase-like (PK-like) 12 259 IPR011009 -
Lele29g0786 728 Coils Coil 57 77 - -
Lele29g0786 728 FunFam serine/threonine-protein kinase dst1 isoform X1 12 274 - -
Lele29g0786 728 Pfam Protein kinase domain 16 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g0786 728 ProSitePatterns Protein kinases ATP-binding region signature. 21 53 IPR017441 GO:0005524
Lele29g0786 728 MobiDBLite consensus disorder prediction 371 603 - -
Lele29g0786 728 MobiDBLite consensus disorder prediction 570 589 - -
Lele29g0786 728 MobiDBLite consensus disorder prediction 336 355 - -
Lele29g0786 728 Coils Coil 654 681 - -
Lele29g0786 728 CDD STKc_MST3_like 13 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0786 Lele-ChrLele29 5117006 5126344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0786 1 728 MAP Kinase Kinase Kinase Kinase AT3G15220 56.627 0.0 766
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Lele29g0786 Pkinase 1.4e-56 CL0016