Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0784 ATGGTAGGGGGATTGAGAAATAAGAGACAGAATGATCGTGTCAACAAAACAATATTCGTCAGCTTCAATTCTGCACACTCGTCTCTCGCCCCGCTCTTTCGCTCACTCTTCCTTCTATTTCTTTTGTCTCCGTCTTCGCCTCGGTCTGCACATCGCCTCTTTTCTCACCTCCTTCTTTCCTATATATACACCTCACGCCTTCCCGCCATGACTAGCAAGGAGATCCTCCATAAAATAAAGGAAAAAGTTGGATTGTCAGATCCTGATTCAGGGAAAGGAAAGAGCAAGATGTCAAAGCAGATAAGTCATGGCTTTCACTTGGTAAAGGGAAGATCAGCTCATGCTATGGAAGATTATCTTGTTGCAAAATTTAAGCAAGTTGATGATCATGAATTGGGTTTGTTTGCAATATTTGATGGCCACATGGGTCACGATGTGGCTGACTACTTACAGTCTCATTTATTTGAAAATATCTTAAAAGAGCCTGACTTCTGGACAGAAACTGGAAAAGCTATCAAGAGAGCATATCGTATAACTGATTCAACCATTCTAGAGAGAGCAGTTGAATTGGGACCAGGGGGCTCCACTGCAGTCACAGCAATATTAATTGATTGTCATAAGCTGGTAATAGCCAATGTTGGGGATTCAAGGGCTGTCTTGTCCAGGAATGGTGTGGCCAAACAGCTATCAGTGGATCATGAGCCAAGCACCGAAAGAGAGGAGATTGAAAACAGAGGTGGTTTTGTATCAAACTTTCCAGGGGATGTTCCTCGCGTGGATGGGCAGTTGGCAGTGTCTAGGGCATTTGGTGACAAAAGCTTGAAGAAACACCTTAGTTCAGAACCACATGTAGCAGAGGAGATTATAGGTGATGATGCAGAGTTTGTTATACTAGCCAGTGATGGATTATGGAAGGTAATGTCAAATCAAGAAGCAGTTGATACTATCAAGGATGTAAAGGATGCTCGTTCAGCGGCAAAGCTTCTTACTGAAGAGGCACTTAACAGGAAGAGCTCAGATGATATCTCCTGCATTGTCTTGAAGTTTCATTGA 1053 0.4302 MVGGLRNKRQNDRVNKTIFVSFNSAHSSLAPLFRSLFLLFLLSPSSPRSAHRLFSHLLLSYIYTSRLPAMTSKEILHKIKEKVGLSDPDSGKGKSKMSKQISHGFHLVKGRSAHAMEDYLVAKFKQVDDHELGLFAIFDGHMGHDVADYLQSHLFENILKEPDFWTETGKAIKRAYRITDSTILERAVELGPGGSTAVTAILIDCHKLVIANVGDSRAVLSRNGVAKQLSVDHEPSTEREEIENRGGFVSNFPGDVPRVDGQLAVSRAFGDKSLKKHLSSEPHVAEEIIGDDAEFVILASDGLWKVMSNQEAVDTIKDVKDARSAAKLLTEEALNRKSSDDISCIVLKFH 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0784 350 Pfam Protein phosphatase 2C 114 342 IPR001932 -
Lele29g0784 350 FunFam Probable protein phosphatase 2C 39 92 350 - -
Lele29g0784 350 ProSiteProfiles PPM-type phosphatase domain profile. 102 349 IPR001932 -
Lele29g0784 350 SMART PP2C_4 92 347 IPR001932 -
Lele29g0784 350 CDD PP2Cc 101 349 IPR001932 -
Lele29g0784 350 Gene3D - 85 350 IPR036457 -
Lele29g0784 350 PANTHER PROTEIN PHOSPHATASE 93 349 - -
Lele29g0784 350 SUPERFAMILY PP2C-like 98 350 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0784 Lele-ChrLele29 5096550 5100390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0784 70 350 PP2C-type Phosphatase Gene Family AT3G15260 75.433 2.43e-158 443