Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0752 ATGAGCAGAGCCGGGGACGAAGAAGAGGAAGACGAGTGCTTCTACGAGTCCCACGACCGCCTAGTTTCCTCATCTTGTTCTTGTTCCACTTCCAACTCTGACGACGACAACGACTCCAATTCCAACTCTCCCAATTATGGTTCCAACCAGCCCTTTACTGTCCCTAAATTCCCTGTCGCCATGTCCAAGTATGACATATGGATCTCCGAACCCTCCTCGGTGTCGGAACGCCGGACCCGTCTCCTCCTTGAGATGGGCCTCAGCGGCGATCCATCATTGTCCCGTGGAAAGCCTACCTCCGCCGCTGATCTTAGAGAAATGGCCAATGGAGATTTTGAGCGATCGCCTTCGTCCGATCACTTGAGCCGTCAGCAACAGGCTGCAAGTTCCAGTTGCTCCACCGCCATGTTCCGATCGAAATCAGACGGTGCAGTGGATCGCAGTGACTTGTCTGTGTCTGGTCAGTCTCATGATCGTTGTAATAAGTCTTCTTTTTGTTCATCTTCTTCAATTCTTTCTATTCATTCGGTCGCGCCAGAGACCGGTTCATTTGTAAATAATCGTAATCTCGTTGTTAAGTCGAGGGGAGTTAATGGTAATGGATCACCAGTTGCTAGTGCGGCTTCCCTAAATAAGCCGCCTTCTGGGAAAAATTGTAAAAGGGGGGATGAAATTCAAAGCGAATCCTCGAACTTGAGCTTGGATTTCGGACACAGTTTGGTGTTATCCATTTCCGAAATTGCAGGTGGGGAGGTAGAGGAGTGTAGTGGGGTTGACCGCGTAAAAGAACAGGTGTGTACCATAAGAGATCTCGATAATGGGAAGGAGTTTGTAGTCAAGGAGATTAAGGAAGACGGAACGTGGAGCAAACTCAAAGAAGTGGGGACTGGAAGGCAGTTGACTATGGAGGAATTTGAGATGACGGTTGGCCACTCTCCAATAGTTCAAGAATTGATGAGACGGCAAAATGTTGAGGAAGGAAATAAGGATAATGTAGATTCTAACGCAAGTGGTGGTAGTGGAGGGGGTTCCAAGCCGAAGAAGAAGGTGGGTTGGTTTAAGAGTATCAAGAGTGTTGCAAGCGCTATGACGGGTTATAAAGAGAGACGGAGTAGTGATGAAAGAGATACCTCATCCGAGAAGGGTGGGCGCAGGTCAAGCTCAGCGACGGATGATAGCCAGGATGGTTCATTTCATGGGCCTGAGAGAGTACGTGTTAGGCAGTATGGGAAGTCTTGCAAAGAGATTACAGGACTTTATAAAAGCCAGGAAATACAGGCTCATACTGGATCTATATGGAGCATTAAGTTTAGTTTGGATGGAAAATATCTTGCCAGTGCAGGTGAGGATTGTGTAATACATGTCTGGCAAGTTGTGGAGTCAGAGAGGAAGGGAGAGCTACTGATGGAGAAAGCAGAAGATGGGAACATGAACATGTTGTTTGTTGTGAACGGGTCGCCAGAGCCAACTTTGCTGTCCCCCGCAATGGACAATCATCCAGACAAGAAGAGAAGGGGGAGGTCATCCATAAGCAGAAAATCGTTGAGCTTGGACCAATTAATGGTGCCAGAAACTACTTTTGCTCTCACAGAAAAGCCCATTTGCTCATTCCAAGGCCATGATAATGATGTCCTTGACCTATCTTGGTCCAAGTCTCAGCATCTGCTCTCATCTTCTATGGACAAAACTGTGCGGCTGTGGCACTTGACTAGCCAGACTTGTTTGAAAGTTTTTTCACACAGTGACTTTGTAACCTGCATCCAGTTTAATCCTGTTGATGATAGATACTTCATTAGTGGATCACTGGATTCTAAGGTTCGCATATGGAGCATTCCTGATCGTCAAGTTGTTGATTATACTGATCTACATGAGATGGTCACTGCAGCTTGCTATACATCTGATGGGCAGGGTGCAGTAGTTGGTTCTTACAAGGGTAGCTGCCATTTATATGATACATCTGATAATAAGTTGCAACAGAAAAGTCAAATCAATTTGCAGAACAAGAAAAAGAAATCGCATCACAAGAAAATCACTGGCTTCCAGTTTGCCCCAGGAAGTTCTGCAGAAGTACTTATCACGTCTGCTGATTCAAGAATTCGGGTTGTTGATGGTGTTGATCTGGTTCATAAGTTCAAAGGATTTCGTAACTCAAATAGCCAGATTTCTGCCTCTCTCACGGCAAACGGTAAATATGTTATCTCAGCAAGTGAGGATTCCCATGTGTATATATGGAGAAATGAAGCCGATTGCAGACCTAACCGGAGCAAAGGTGTCACTGTAACGCAATCTTATGAACATTTTCACTGTAAAGATGTTTCAGTGGCGATACCTTGGCCTGGTATGGGCGATGCCTGGGAGATGCCGGATGCTTTCTCTGGAGAACAGACCGCAGATGATAATATTCTGGATGATGTCATGTCAGCCAATCATCCTCCTACTCCAGTGGAGGAAAATTTTGGTACCGACGGTTCACAATCAGCATCAGGATGCACCAACAGCCCTCTTCACGGAACAATTGCAAGCACAACAAATGATTACTTCTTCGATAGAATTTCCGCGACATGGCCAGAGGAAAAACTTGTCGTAGCTGCACGGAACCGAACCCCTCGAGTCAGTATAGATCTCTCCAGTGGGGTAAGCCAAAACATGTCAGCATGGGGTATGGTGATTGTAACTGCTGGCCTTCGAGGGGAAATTAGAACTTTCCAAAATTTTGGTTTGCCCCTTCGAATATGA 2736 0.4609 MSRAGDEEEEDECFYESHDRLVSSSCSCSTSNSDDDNDSNSNSPNYGSNQPFTVPKFPVAMSKYDIWISEPSSVSERRTRLLLEMGLSGDPSLSRGKPTSAADLREMANGDFERSPSSDHLSRQQQAASSSCSTAMFRSKSDGAVDRSDLSVSGQSHDRCNKSSFCSSSSILSIHSVAPETGSFVNNRNLVVKSRGVNGNGSPVASAASLNKPPSGKNCKRGDEIQSESSNLSLDFGHSLVLSISEIAGGEVEECSGVDRVKEQVCTIRDLDNGKEFVVKEIKEDGTWSKLKEVGTGRQLTMEEFEMTVGHSPIVQELMRRQNVEEGNKDNVDSNASGGSGGGSKPKKKVGWFKSIKSVASAMTGYKERRSSDERDTSSEKGGRRSSSATDDSQDGSFHGPERVRVRQYGKSCKEITGLYKSQEIQAHTGSIWSIKFSLDGKYLASAGEDCVIHVWQVVESERKGELLMEKAEDGNMNMLFVVNGSPEPTLLSPAMDNHPDKKRRGRSSISRKSLSLDQLMVPETTFALTEKPICSFQGHDNDVLDLSWSKSQHLLSSSMDKTVRLWHLTSQTCLKVFSHSDFVTCIQFNPVDDRYFISGSLDSKVRIWSIPDRQVVDYTDLHEMVTAACYTSDGQGAVVGSYKGSCHLYDTSDNKLQQKSQINLQNKKKKSHHKKITGFQFAPGSSAEVLITSADSRIRVVDGVDLVHKFKGFRNSNSQISASLTANGKYVISASEDSHVYIWRNEADCRPNRSKGVTVTQSYEHFHCKDVSVAIPWPGMGDAWEMPDAFSGEQTADDNILDDVMSANHPPTPVEENFGTDGSQSASGCTNSPLHGTIASTTNDYFFDRISATWPEEKLVVAARNRTPRVSIDLSSGVSQNMSAWGMVIVTAGLRGEIRTFQNFGLPLRI 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0752 911 MobiDBLite consensus disorder prediction 491 510 - -
Lele29g0752 911 MobiDBLite consensus disorder prediction 364 406 - -
Lele29g0752 911 Pfam WD domain, G-beta repeat 424 456 IPR001680 GO:0005515
Lele29g0752 911 Pfam WD domain, G-beta repeat 707 744 IPR001680 GO:0005515
Lele29g0752 911 Pfam WD domain, G-beta repeat 532 567 IPR001680 GO:0005515
Lele29g0752 911 Pfam WD domain, G-beta repeat 573 610 IPR001680 GO:0005515
Lele29g0752 911 MobiDBLite consensus disorder prediction 367 388 - -
Lele29g0752 911 MobiDBLite consensus disorder prediction 1 54 - -
Lele29g0752 911 ProSiteProfiles Trp-Asp (WD) repeats profile. 577 619 IPR001680 GO:0005515
Lele29g0752 911 FunFam Transducin/WD40 repeat-like superfamily protein 383 486 - -
Lele29g0752 911 Gene3D - 411 768 IPR015943 GO:0005515
Lele29g0752 911 MobiDBLite consensus disorder prediction 326 349 - -
Lele29g0752 911 MobiDBLite consensus disorder prediction 146 162 - -
Lele29g0752 911 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 577 611 - -
Lele29g0752 911 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 537 571 - -
Lele29g0752 911 ProSiteProfiles Trp-Asp (WD) repeats profile. 537 577 IPR001680 GO:0005515
Lele29g0752 911 MobiDBLite consensus disorder prediction 196 213 - -
Lele29g0752 911 SMART WD40_4 418 457 IPR001680 GO:0005515
Lele29g0752 911 SMART WD40_4 612 651 IPR001680 GO:0005515
Lele29g0752 911 SMART WD40_4 571 610 IPR001680 GO:0005515
Lele29g0752 911 SMART WD40_4 530 568 IPR001680 GO:0005515
Lele29g0752 911 SMART WD40_4 658 703 IPR001680 GO:0005515
Lele29g0752 911 SMART WD40_4 704 745 IPR001680 GO:0005515
Lele29g0752 911 MobiDBLite consensus disorder prediction 20 52 - -
Lele29g0752 911 FunFam WD repeat-containing protein 44 518 784 - -
Lele29g0752 911 ProSiteProfiles Trp-Asp (WD) repeats profile. 425 466 IPR001680 GO:0005515
Lele29g0752 911 MobiDBLite consensus disorder prediction 196 217 - -
Lele29g0752 911 MobiDBLite consensus disorder prediction 110 162 - -
Lele29g0752 911 MobiDBLite consensus disorder prediction 119 138 - -
Lele29g0752 911 PANTHER WD REPEAT DOMAIN 44 6 908 IPR040324 -
Lele29g0752 911 SUPERFAMILY WD40 repeat-like 419 746 IPR036322 GO:0005515
Lele29g0752 911 PRINTS G protein beta WD-40 repeat signature 555 569 IPR020472 -
Lele29g0752 911 PRINTS G protein beta WD-40 repeat signature 444 458 IPR020472 -
Lele29g0752 911 PRINTS G protein beta WD-40 repeat signature 597 611 IPR020472 -
Lele29g0752 911 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 425 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0752 Lele-ChrLele29 4856932 4862430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0752 524 742 U-box Gene Family AT1G04510 27.615 3.98e-07 52.0