Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0743 ATGGGAAATTCGCCTTTGTCCTTGACGAGTATATGCATTGCACCGCCAAAAAAAATATCAGCAGGAGTTCGAGCTGCTTCTTCATCTTCTTCGATCTTCTTCATTGTACGTGTCAGAATGGGAGTTCCAGCGACCGATACGCTTGCCCAACTGAGTTTGCCTCCGGGTTTTCGGTTTTTCCCCACAGATGAGGAGCTTCTGGTTCAGTATCTATGCCGGAAAGTAGCCGGCCACAATTTCTCTCTGCAAATTATCGGCGAGATCGACTTGTACAAGTTCGACCCATGGGTCCTACCGAGCAAGGCCATTTTTGGGGAGAAAGAATGGTATTTTTTCAGCCCCCGAGACCGGAAGTACCCGAACGGGTCTCGACCGAACAGAGTTGCTGGGTCTGGATACTGGAAAGCCACCGGAACCGATAAGATCATTACCACCGAAGGCCGGAAGGTTGGCATCAAGAAAGCTCTCGTTTTCTACGTTGGAAAAGCACCCAAAGGCACCAAAACCAATTGGATCATGCACGAGTATCGCCTTCTTGACAGTTCCAGAAAGAATGGTAGCTCCAAGCTTGATGAGTGGGTTCTGTGTCGAATTTACAAGAAGATCTCGAGCGCCCAGAAGAATATGCTTTCAGGCGTTTCGAGCAAAGAATACAGTTACAGCAACGGGTCTTCTCCGTCGTCATTGTCTCACTTGGACGACATGCTCGAATCATTGCCGGAGATCGAGGACCAAAGCTTCACCCTGCCGCATTTGAACTCGCTCAAGGCGCTACCGCAAGACGAGAAGCTAAATTTCAATAATCTCGGCGCCGGAAAATTTGTGGACTGGTCTAACCCGGCGGTACTTAACTCAGTACCCGACTTCGTTCCCGGAAGTCAGGCTCAGGGGATGGTGAGTTACAACCCAGGAAATGATCTTTATGTTCCCTCCATCTCTCAGGTCTGCCACACGGGATTGACGGCGCCACCGCCTGTGGAGAAGCTTGGAAAAACATTTGAGAATTCTGGCGGCTACTTTGATCAGCCGAATGCGAATGTGGGATTCTCGAACTCCATGAACCCGTATGGAATCAGATATCCGATTGGGTTCGGATCTCAACAATGA 1107 0.4959 MGNSPLSLTSICIAPPKKISAGVRAASSSSSIFFIVRVRMGVPATDTLAQLSLPPGFRFFPTDEELLVQYLCRKVAGHNFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLLDSSRKNGSSKLDEWVLCRIYKKISSAQKNMLSGVSSKEYSYSNGSSPSSLSHLDDMLESLPEIEDQSFTLPHLNSLKALPQDEKLNFNNLGAGKFVDWSNPAVLNSVPDFVPGSQAQGMVSYNPGNDLYVPSISQVCHTGLTAPPPVEKLGKTFENSGGYFDQPNANVGFSNSMNPYGIRYPIGFGSQQ 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0743 368 ProSiteProfiles NAC domain profile. 53 201 IPR003441 GO:0003677|GO:0006355
Lele29g0743 368 SUPERFAMILY NAC domain 48 201 IPR036093 GO:0003677|GO:0006355
Lele29g0743 368 FunFam NAC domain-containing protein 72-like 62 206 - -
Lele29g0743 368 Gene3D NAC domain 62 206 IPR036093 GO:0003677|GO:0006355
Lele29g0743 368 Pfam No apical meristem (NAM) protein 54 178 IPR003441 GO:0003677|GO:0006355
Lele29g0743 368 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 52 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0743 Lele-ChrLele29 4766709 4768223 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0743 40 301 NAC Transcription Factor Family AT4G27410 65.000 4.54e-121 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele29g0743 NAM 5.7e-36 No_clan