Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0742 ATGGAGAGCACCGAATCGTCTACCGGTTTGCAGCAGCCCAACCTTCCGCCGGGATTCCGGTTCCACCCGACCGACGAAGAGCTCGTCGTTCACTACCTGAAGAAGAAGGCCTCCTCTGCTCCTCTCCCCGTGGCAATCATCGCCGAAGTTGATCTCTACAAGTTCGATCCGTGGGAACTCCCAGCTAAGGCAGCGTTTGGAGAGCAGGAATGGTACTTTTTTAGCCCGAGGGATAGGAAGTACCCGAACGGAGCTAGGCCAAACAGGGCTGCAACGTCTGGTTATTGGAAAGCTACAGGAACTGATAAGCCCGTGTTGACATCTAATGGAAACCAGAAGGTAGGGGTGAAGAAAGCTTTGGTTTTCTATGGAGGGAAGCCACCAAGAGGGATCAAAACCAACTGGATCATGCATGAATATAGGCTTGCTGATAATAAGCCTAACAATAAACCTCCTGGTTGTGACTTAGGCAACAAGAAAAACTCTCTCCGGCTAGACGACTGGGTGCTGTGCCGGATATACAAGAAGAGCAACACACATAGATCGCCGATGGACCACGATGATTCATCGATGGATGATATTATTGGAGGGGTTCCTCCTTCGATCTACGTTGGACAGATGAACGCCAGATTCAATCCTTCTAAGATGTCTACAACCTACGGCGGCGGTGGGGGTGGCGGAGTCGGAGTCGGAGGATCGTTATTGCTGGACACAAACCACGACCACAACTTACTGGAAAGGGTTGTCGTCGCCAGCAACATCAACAACAATGGAATCAACAACACAGAAGTTCCTAGTTTGGTTACTACTATGGCTTCTTCAAACCTTACTACTTCTGTTACAACCCTACCTTCTAAACGAACACTGCCATCGCTGTACTGGAGCCCAGATGAGGATTTGGACGGAACCTCTTCGAAAAGATTGAGCTTGGACAATAATGAGAATGGAGGGTGCAGTGGCGGCGTTGGCGTTGGCGGTGGCGTCGGGGTTACTGCTGCTGGAGCTAGTTCTATTGCTTCTCTGCTAAACCAGCTTCCACAGTCTCCTTCAATGGTGGGATCTATAGAAGATGGAATGTTTCGGGCACAGTATCATCAAATTCCTGGAATGCATTGGTATGCTTAA 1125 0.4969 MESTESSTGLQQPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVAIIAEVDLYKFDPWELPAKAAFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSNGNQKVGVKKALVFYGGKPPRGIKTNWIMHEYRLADNKPNNKPPGCDLGNKKNSLRLDDWVLCRIYKKSNTHRSPMDHDDSSMDDIIGGVPPSIYVGQMNARFNPSKMSTTYGGGGGGGVGVGGSLLLDTNHDHNLLERVVVASNINNNGINNTEVPSLVTTMASSNLTTSVTTLPSKRTLPSLYWSPDEDLDGTSSKRLSLDNNENGGCSGGVGVGGGVGVTAAGASSIASLLNQLPQSPSMVGSIEDGMFRAQYHQIPGMHWYA 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0742 374 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
Lele29g0742 374 Gene3D NAC domain 24 181 IPR036093 GO:0003677|GO:0006355
Lele29g0742 374 MobiDBLite consensus disorder prediction 1 20 - -
Lele29g0742 374 SUPERFAMILY NAC domain 5 176 IPR036093 GO:0003677|GO:0006355
Lele29g0742 374 PANTHER NAC TRANSCRIPTION FACTOR 56 15 192 - -
Lele29g0742 374 FunFam NAC transcription factor 56 24 181 - -
Lele29g0742 374 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0742 Lele-ChrLele29 4750257 4751760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0742 1 374 NAC Transcription Factor Family AT3G15510 53.747 8.99e-125 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele29g0742 NAM 7.4e-40 No_clan