Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele29g0740 | ATGGTAAGTTGCATCAGGAAACTACCCCCCTGCTTGGCAGCTTTCTTCTTCATAGCCCTTCTTCTCTCAGGCACTGGTAAGTCATCTCTCTTCTTTATTTATCATCTCTCTCTCACGTACATCTTTAATTTGGATATATTGTTTCTGACATCTCTCTTCTTTTTCATTATATATCTGGATGCAGAAATAGAAAGGGTGGAAGCAAAAGCAGTGTGTGACGCGCCAAGTGGAACATTTAGAGGGCCCTGTATCATCCCATCTAAATGTGCTGAACATTGCAAGTTAAATGAGAATGCTCTTGGAGGACAATGCTTCGTCTTAGCTTGTTATTGCAAGGTCGACTGTTAA | 348 | 0.4109 | MVSCIRKLPPCLAAFFFIALLLSGTGKSSLFFIYHLSLTYIFNLDILFLTSLFFFIIYLDAEIERVEAKAVCDAPSGTFRGPCIIPSKCAEHCKLNENALGGQCFVLACYCKVDC | 115 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele29g0740 | 115 | ProSitePatterns | Gamma-thionins family signature. | 70 | 93 | IPR008176 | GO:0006952 | |
| Lele29g0740 | 115 | SMART | gth_4 | 71 | 115 | IPR003614 | GO:0006952 | |
| Lele29g0740 | 115 | Pfam | Gamma-thionin family | 71 | 115 | - | - | |
| Lele29g0740 | 115 | Gene3D | - | 70 | 115 | IPR036574 | - | |
| Lele29g0740 | 115 | SUPERFAMILY | Scorpion toxin-like | 71 | 115 | IPR036574 | - | |
| Lele29g0740 | 115 | PANTHER | DEFENSIN-LIKE PROTEIN 1 | 48 | 112 | - | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele29g0740 | 42 | 115 | Plant Defensins Gene Families | AT2G02140 | 33.333 | 7.53e-07 | 42.0 |