Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0739 ATGTCCATAACGAACCGCATTGTTGACAGCGGAAGTTGTTCTTTGGCCTCAGTTTCTGATTCCAAACTAACCGTTTCTAAGGGAAATAACAAAAAGAAGAGAACGTTGCGTTCTCTCAGGATAACCTTCGTGCAAGACGACATGGCTTCCTCCCTTCTCAAGTTGTCTTCCTCCACTGCCTTCATCTGCATTGCCCTCTTGGTTTCCTCTCCCACTGGAGAAGTAACAGTGGAGTACAAAGGTTTGAGGTCCTTCCGGTTGTTGCCGACGCTATTGCGTTCTACCGTCTGCAACTGTGCCGATAAGATGATGATGATGGCTGGGTGGTGGAACATTATGGCTGCTTCCCTTCTCAAGTTATCTTCCTTCATTGCCTTCCTCTGCTTTGCTCTCTTGCTTTCCTCTCCCAACGAGAATGTTGAAGCAGCAGTTTGTGAGAGAGTTAGTGGCAAATTTGTTGGGTATTGCGTAGACAATTTTGTATGTGAAGATACTTGCCAAAGCGAGGGTGCTTATGCGGGAGATTGTCAACCTCGTGGATCTGGACGTTCTTGCATCTGCTACTACTACTGTTAA 576 0.4653 MSITNRIVDSGSCSLASVSDSKLTVSKGNNKKKRTLRSLRITFVQDDMASSLLKLSSSTAFICIALLVSSPTGEVTVEYKGLRSFRLLPTLLRSTVCNCADKMMMMAGWWNIMAASLLKLSSFIAFLCFALLLSSPNENVEAAVCERVSGKFVGYCVDNFVCEDTCQSEGAYAGDCQPRGSGRSCICYYYC 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0739 191 Pfam Gamma-thionin family 144 191 - -
Lele29g0739 191 ProSitePatterns Gamma-thionins family signature. 143 166 IPR008176 GO:0006952
Lele29g0739 191 SMART gth_4 144 191 IPR003614 GO:0006952
Lele29g0739 191 Gene3D - 141 191 IPR036574 -
Lele29g0739 191 SUPERFAMILY Scorpion toxin-like 143 191 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0739 Lele-ChrLele29 4719191 4724787 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0739 122 191 Plant Defensins Gene Families AT1G19610 32.877 4.47e-07 44.3