Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0737 ATGGCCTCCTCTCTTTTCAAGTTCACGGTCTTCCTCTGCATTGCCCTCCTCCTTTTCTCTCCCAATGCGAATGTTGCAGAAGCAAAACTGTGTAGAAGACTGAGCACAACATTTTCTGGGTTTTGTGGTCGAAATTGCCCCTGTGATGTTAAATGCTTAAGAGAGGGTGCTGTTTCTGGAAGTTGCCATGTTCATGGTTTTGGACGTGCTTGCTTCTGCTACCGCAAATGTTGA 234 0.4615 MASSLFKFTVFLCIALLLFSPNANVAEAKLCRRLSTTFSGFCGRNCPCDVKCLREGAVSGSCHVHGFGRACFCYRKC 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0737 77 SMART gth_4 30 77 IPR003614 GO:0006952
Lele29g0737 77 SUPERFAMILY Scorpion toxin-like 28 77 IPR036574 -
Lele29g0737 77 Pfam Gamma-thionin family 29 77 - -
Lele29g0737 77 Gene3D - 27 77 IPR036574 -
Lele29g0737 77 PANTHER DEFENSIN-LIKE PROTEIN 1 1 77 - -
Lele29g0737 77 ProSitePatterns Gamma-thionins family signature. 29 52 IPR008176 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0737 Lele-ChrLele29 4705534 4710639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0737 1 77 Plant Defensins Gene Families AT1G19610 43.038 1.73e-13 57.8