Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0729 ATGGTGAAGGTGAACATAGTGAAGTGGGTTTCTTTTGTTCTGGTAGTGTTTTTGTTCTATGTGGATGAATCATTTGCCTCGTACAACCCTCCTGATAAATTTCTGATTGCTTGTGGTTCTTCTCAAAACATCACTTTCCAAGGTCGTACTTTTGTTCCTGATTCTCAACACTCTTCATTAGTATTGGAAACTGGGAATTCTATTGTTGCTGTTGATTCTAGTTCTCGTGTCCCACCATTCCCAATATACCAATCAGCTCGGATTTTCACTGAGAAAGCTTCTTATAGCTTTGAAATTCAGCAACAAGGTCGTCACTGGGTCCGCCTGTACTTCTTCCCTGTCAAAAACCCTAGTCATGATTTGACTTCTGCTTCTTTAACTGTGGTCACCAATGAATTCGTTCTCTTGAATAACTTCACCTTTAAGAACTACAATGGTTCTTATATGTTCAAGGAGTACGCAATCGATGTTACATCTGATAGCTTAACTCTTACCCTCATTCCTTCAAATGGTTCAGTGGTTTTTGTCAATGGTATTGAAGTTGTATCAATGCCACATGACTTGTTTGTTGATCAAGCATTGGCTTTAAACCCATCAGAACCATTCAGTGGCCTTTCTGAACTCGCCTTTGAAACCGTTTTTCGGTTAAATATGGGAGGTCCTCTGCTCACTGCTCAAAATGACACCCTTGGAAGAACTTGGGAGAATGATCTGAAATACCTTCATGTGAATAGTTCTGTTATTAATGTTTCAGTTAGCCCTTCAACCATCAAGTATCCAGCTGGTGTTTCACCTGAGACAGCACCAAACTGGGTTTATGCAACTGCAGAAACAATGGATGATGCAAATGTGGCTCAAAATACTTTCAACATTACTTGGGTCTTCCCTGTCGATCCAAACTTCTCTTATTTCATAAGGGCACATTTTTGTGATATTATGAGCAAATCCCTGAATAGTTTAGTGTTTGATATGTTCATAAATTCTGATGTAGCTCTTGGAGGTTTTGACATCTCATCCATAACTGGTGACTTGGCTGTGCCTTACTACAAGGACTTCGTTTCTAATGCTTCCACAGATTCAAACACTTTGAGTGTAAGTGTTGGACCGGATTCAGTGGCAGATATGTCAAATGCCACTATGAATGGGCTGGAGATAATGAAAATTAGTAATGCAGTGAAGAGCTTGGATGGGCTTTCTTCAGTGGAGAGTCTTCTTCCTAGTTCATCATCTTCAAAGGCGAACAAGATAGGAATAATAGTTGGTTCTGCTGTTGGAGCCATAGCTGCTATAATATTGGTTGGTTTGTGTTACTATTACTGCTTTGTGAGAGGCCGGTCGAAGTCCACTCAACAAGGTCATCCATGGCTGCCTTTGCCTTTATATGGAATCTCTCAGACCTTGACAAAGTCAACAATGTCACAGAAGAGTGGAACTGCGAGTTACATTTCTTTAACTTCGACGAATCTTGGGCGTTTCTTCACTTTCCAGGAGATCCTAGATGCAACCAACAAGTTTGATGAGAAGCTTCTTCTTGGGGTTGGTGGTTTTGGTAGGGTTTATAAAGGAACACTTGAAGATGGAACCAATGTAGCTGTCAAAAGAGGCAACCCCAGATCAGAACAAGGTATTGCTGAATTCAGAACCGAAATCGACATGTTGTCCAAGCTTCGCCATCGCCATCTCGTGTCTCTCATAGGCTATTGTGATGAGAGATCAGAAATGATTCTTGTCTATGAATATATGGCTAATGGCCCTCTTAGAAGCCATTTGTATGGAGCAGACCTGCCACCTCTTTCATGGAAACAACGGCTCGAAATCTGCATTGGAGCAGCCAGAGGCCTGCATTATCTTCACACTGGGGCAGCTCAAAGCATAATTCACAGAGATGTGAAGACAACAAACATCCTCTTGGATGACAATTTTGTTGCCAAAGTTGCAGACTTTGGCCTCTCGAAAACCGGTCCTGCTCTGGATCAGACACATGTAAGCACTGCAGTGAAAGGCAGTTTCGGTTATCTTGATCCTGAGTACTTCAGAAGGCAACAACTCACAGAGAAATCAGATGTGTATTCATTTGGAGTAGTTCTAATGGAAGTATTATGCACAAGACCAGCTTTGAATCCTGTCCTTCCAAGGGAGCAAGTTAACATAGCCGAATGGGCAATGACATGGCAGAAAAAGAGCATGCTTGATCAAATCATGGATCAAAATTTGGTTGGGAAGGTGAGTCCCGCTTCTCTTAAGAAGTTCGGCGAGACAGCCGAGAAATGCTTGGCCGAGCACGGCGTGGACAGGCCATCCATGGGAGATGTATTGTGGAACCTTGAATATGCTCTGCAGCTTCAAGAGACGTCTTCAGCACTCACAGAACCTGAAGATAATAGCACAAATCACATTACTGGAATTCAGCTGACTACACTTGAGCCTTTTGATAACAGTGTAAGTATGATTGATGTTGGTAACTCTGGCACAGATGATGATGCAGAAGATGCTGCAACAAGTGCAGTGTTCTCACAATTGGTAAATCCTCGAGGAAGATAA 2541 0.4215 MVKVNIVKWVSFVLVVFLFYVDESFASYNPPDKFLIACGSSQNITFQGRTFVPDSQHSSLVLETGNSIVAVDSSSRVPPFPIYQSARIFTEKASYSFEIQQQGRHWVRLYFFPVKNPSHDLTSASLTVVTNEFVLLNNFTFKNYNGSYMFKEYAIDVTSDSLTLTLIPSNGSVVFVNGIEVVSMPHDLFVDQALALNPSEPFSGLSELAFETVFRLNMGGPLLTAQNDTLGRTWENDLKYLHVNSSVINVSVSPSTIKYPAGVSPETAPNWVYATAETMDDANVAQNTFNITWVFPVDPNFSYFIRAHFCDIMSKSLNSLVFDMFINSDVALGGFDISSITGDLAVPYYKDFVSNASTDSNTLSVSVGPDSVADMSNATMNGLEIMKISNAVKSLDGLSSVESLLPSSSSSKANKIGIIVGSAVGAIAAIILVGLCYYYCFVRGRSKSTQQGHPWLPLPLYGISQTLTKSTMSQKSGTASYISLTSTNLGRFFTFQEILDATNKFDEKLLLGVGGFGRVYKGTLEDGTNVAVKRGNPRSEQGIAEFRTEIDMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGADLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKSMLDQIMDQNLVGKVSPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQLQETSSALTEPEDNSTNHITGIQLTTLEPFDNSVSMIDVGNSGTDDDAEDAATSAVFSQLVNPRGR 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0729 846 Pfam Malectin-like domain 36 388 IPR024788 -
Lele29g0729 846 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Lele29g0729 846 Pfam Protein tyrosine and serine/threonine kinase 510 772 IPR001245 GO:0004672|GO:0006468
Lele29g0729 846 Gene3D Phosphorylase Kinase; domain 1 464 580 - -
Lele29g0729 846 CDD STKc_IRAK 511 776 - -
Lele29g0729 846 PANTHER OS07G0166700 PROTEIN 491 782 IPR045272 GO:0004714|GO:0006468
Lele29g0729 846 SUPERFAMILY Protein kinase-like (PK-like) 481 776 IPR011009 -
Lele29g0729 846 FunFam receptor-like protein kinase FERONIA 467 580 - -
Lele29g0729 846 Gene3D - 34 185 - -
Lele29g0729 846 Gene3D - 208 390 - -
Lele29g0729 846 Gene3D Transferase(Phosphotransferase) domain 1 581 801 - -
Lele29g0729 846 FunFam Receptor-like protein kinase FERONIA 209 390 - -
Lele29g0729 846 FunFam Receptor-like protein kinase FERONIA 581 797 - -
Lele29g0729 846 FunFam Putative receptor-like protein kinase 33 185 - -
Lele29g0729 846 ProSitePatterns Protein kinases ATP-binding region signature. 511 533 IPR017441 GO:0005524
Lele29g0729 846 SMART serkin_6 505 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g0729 846 ProSiteProfiles Protein kinase domain profile. 505 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0729 Lele-ChrLele29 4619836 4622376 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0729 26 796 Receptor kinase-like Gene Family AT2G21480 53.069 0.0 813
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lele29g0729 Malectin_like 9.2e-38 CL0202