Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0726 ATGGAGCTTTTTACTTGGACGCCATTTGCTTTGGCTTTTCTTCTTCTTCTAAGCCTGACTACTAAATCGTCTTCCTCATTCACACTTGGCGATAACTACTTACTCGCTTGTGGTTCTTCCGGTGACATACACTTCCAGGGTCGGACTTTCCTTCCTGAATCTGTCTATTATGATAAAGGTACATTAGACTTGAAAAGCCAGAAATCTGTTGCTGTTACCTCTGATTCTTCTGCTCCATCTCCAATCTACCAGTCAGCTACAATCTTTCGGGGGACAGCTTCATATATATTCAGAATTGAACATCAAGGTCAGCACTGGATTCGACTTTACTTCTACCCTTTCCCCAAATCTCACCAGAACATGTCATCTGCCTCATTAACAGTAGTCGCTGATAGTGTTGTGCTTCTCAACGATTTCACTTTCATGGAGTTTGGTGGTTCTTACTTGTTCAAGGAGTATGTAATGGATATCACGTCCACCACCTTGGCTCTCACCTTCATCCCTTCTGCAAATTCATTTGTGTTTGTTAATGCAATAGAAGTTGTCTCCACACCAGGTGATCAAGGCATTTATGCAATCAATAATACATCAGGTCATTTGCTTCATGTTTCAAAATTTGTCCTTGAAACTGTTTACCGGTTAGACATGGGTGATGAATCCCTCACTACTCGAAATGACGAACTTGGCCGGAACTGGGAGAGTGATGAAAAATACATGGCCGCCAATAGTAGAGCGCTGAATATTTCAGTTAATACTCAATATATAGAAGATAATTCTGGATTAATACCTGTAATAGCACCAGATTGGGTCTATGCTACAGCCAAAGCCATGGCAGATTCAGGAAGCTCAAATTTAAATGGTATTGCTTATGAAAGAGTCATACTTGACGATGTATATCCTCGCTCATATATATATGAGCGACATTACATGGATTTTGTTGTCTCTGCAAGAGGAAACAATTTGACAGTAACTGTGGCTCCTGAGAGAATGGCAAATAGTAGAAATGCAACCATGAACGGGCTGGAGATAATGAAGATCATTGATGAAGTTAGAACCTTGGATGGACGGGCGTTCGTGAAATTATCAATAATAGTTGGATCTATCTTCGGTGCTGCAGCATTTCTAGTTCTCATTGCAGTAGCTTTATATTACTTGAAAACTTACAGGTCAAAGGCAAGCCCCAGAGCCACCATCACCGGATCATGCAAGCTTTTCACTTTACAAGAAATCAGTGAAGCAACTAACAACTTTGACGAATGTCTGCTTCTTGGAGGGGGCGGTTTTGGCAAGGTGTACAAAGGAATGATGACCAATGGGAAACAAGTAGCCATCAAAGTGGCCAATCCACAATCAGGACAGGGTCTTCGAGAATTTAAGAACGAGATTGAATTGCTATCCAAGCTCTCTCATCAGAATCTTGTCTCTCTGATGGGTTATTGTGATGAAGACTCAAAAATGATTCTAGTGTACGAATTCTTGGTGAATGGATCTTTAAGTGGTCATCTCTATGGGACAGACTTTCTTCCTTTATCATGGAAGCAACGACTACAAATATGCATTGGGACTGCAAAAGGTCTTCATTACCTACACACAGGGGCTGCTCAAGGCATAATCCATCGTGATGTTAAGACAGCAAATATTCTCTTGGATGAGAATTTTGATCCAAAAGTCGCCGATTTTGGAATCTCAAGAAAAGGTCCACCTCTTGATAGGAGCCATGTTACAACTCTTGTAAAGGGAAGCTTTGGTTATCTTGACCCTGAGTATTTTAGAACAAAACATCTCACAGAGAAATCAGACGTGTTCTCATTTGGGGTGGTTCTGATGGAAGTTATCTGTGGCAAGCCTGCTTTAGATGACACTCGTCCAACAGAGCATCTTAATTTGGCAACATGGGCATCAAGCTGCAAAGAAAAGGGAACCTTTCATGAGATTATAGACCCAAATTTGATTGGGAAAGTGAACTTAGATTCTCTAAACAAGGTTCATGAGTTGGCTTTGAAGTGCTTGGAGGAGCGTCGCATAAATAGACCACCAATGGTGTATGTACTGTGTGAGCTTGAAGATGCTCTCGATATTGCGTTGGCTTCAGCAATTCAGCAAGTTTCTGGGGCTTGTGCCATTGATGTGATTGCAGAAAATTCAAACCAGGATGAAAAGGAACAAAAATTCGCTAGAAATCTTGTTTCTGGTGTTACACCTCCATTTCTTTTTATAAAATCGTTTGTCTGTATACCTGATGATATCTTTGTTAATGTAATCAATATTACAAATCTGGTCCTTGAAATTGTTTACCGTTTGGAAGTGAGAAATGAATCTCTGATCACCACTAGGAATGATGATAAACTTGGTCGAAACTGGGAAAAAAGTGATCTGAAAGTAACTGGAGCTCCAGACACAACAACAAATAGCAGAAATGCAACCATAAGTGGGCTGGAGATAATGAAGATCATCAATGGAGTCGGAATTCTTGATGGAGTAACAACTTCCACAGATAGTGTTCTTCCCAAGAATCCATCCTCAAGAATTGTGAAAATAGAAATTATTGTTGGGTCTATCATTGGTGCTGCAGCTTTCTTAGTTCTCACTGCAATAACGTTATGTTACATAATAGATCACAGGTCCAAGGCAAGAAGCTTCAGAACTACCCCAGTATCATGCAGGATTTTCACTTTACAGGAAATCAGTGAAGCAACAAACAGCTTTGACGTGTGTCTTCTTCTTGGAGGAGGTGGTTTTGGCAAGGACTACAAAGGAAGGATGAATAATGGGAAAAAAGTAGCCATCAAAGTAGCGAATCCTGCAGCAAGACAAGGTCTTCATGAATTTCAGAATGAGATTAAATTGCTATCCAAGCTTTCTCATCAGAATCTTATCTTTCTAATAGGCTGCTGTCCAACTCTTGATAAGAGCCATGTAACAAACCTTGTAAAGGGCAGCTTTGGTTATCATGATCCTGAGTATTTCAGAAGAAAATATCTCACAGAGAAATCAGATGTGTTCTCATTTGGGATGGTTCTGATAGATGTTGTCTGTGACCCAAATTTGATTGAGAAAGTGAACTTAGATTCTCTAAACAAGGTACGTGAGTTGGCTTGGAAGTGCTTGGAGGAGCGTCGCAGAAATAGACCGCCAATGGGGTATGTGCTGTGTGAGCTTGAAGATGCTCTCCACATTGAGTTGGCTTCACCAATTCAGCAAGTTTCTGTGGATTGTGCCAGTTATTTACTTTTCTCGTGCCGTGTAGAAAGACAGTAA 3258 0.4061 MELFTWTPFALAFLLLLSLTTKSSSSFTLGDNYLLACGSSGDIHFQGRTFLPESVYYDKGTLDLKSQKSVAVTSDSSAPSPIYQSATIFRGTASYIFRIEHQGQHWIRLYFYPFPKSHQNMSSASLTVVADSVVLLNDFTFMEFGGSYLFKEYVMDITSTTLALTFIPSANSFVFVNAIEVVSTPGDQGIYAINNTSGHLLHVSKFVLETVYRLDMGDESLTTRNDELGRNWESDEKYMAANSRALNISVNTQYIEDNSGLIPVIAPDWVYATAKAMADSGSSNLNGIAYERVILDDVYPRSYIYERHYMDFVVSARGNNLTVTVAPERMANSRNATMNGLEIMKIIDEVRTLDGRAFVKLSIIVGSIFGAAAFLVLIAVALYYLKTYRSKASPRATITGSCKLFTLQEISEATNNFDECLLLGGGGFGKVYKGMMTNGKQVAIKVANPQSGQGLREFKNEIELLSKLSHQNLVSLMGYCDEDSKMILVYEFLVNGSLSGHLYGTDFLPLSWKQRLQICIGTAKGLHYLHTGAAQGIIHRDVKTANILLDENFDPKVADFGISRKGPPLDRSHVTTLVKGSFGYLDPEYFRTKHLTEKSDVFSFGVVLMEVICGKPALDDTRPTEHLNLATWASSCKEKGTFHEIIDPNLIGKVNLDSLNKVHELALKCLEERRINRPPMVYVLCELEDALDIALASAIQQVSGACAIDVIAENSNQDEKEQKFARNLVSGVTPPFLFIKSFVCIPDDIFVNVINITNLVLEIVYRLEVRNESLITTRNDDKLGRNWEKSDLKVTGAPDTTTNSRNATISGLEIMKIINGVGILDGVTTSTDSVLPKNPSSRIVKIEIIVGSIIGAAAFLVLTAITLCYIIDHRSKARSFRTTPVSCRIFTLQEISEATNSFDVCLLLGGGGFGKDYKGRMNNGKKVAIKVANPAARQGLHEFQNEIKLLSKLSHQNLIFLIGCCPTLDKSHVTNLVKGSFGYHDPEYFRRKYLTEKSDVFSFGMVLIDVVCDPNLIEKVNLDSLNKVRELAWKCLEERRRNRPPMGYVLCELEDALHIELASPIQQVSVDCASYLLFSCRVERQ 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0726 1085 Pfam Protein tyrosine and serine/threonine kinase 908 967 IPR001245 GO:0004672|GO:0006468
Lele29g0726 1085 Pfam Protein tyrosine and serine/threonine kinase 423 683 IPR001245 GO:0004672|GO:0006468
Lele29g0726 1085 Gene3D Phosphorylase Kinase; domain 1 869 969 - -
Lele29g0726 1085 Gene3D Phosphorylase Kinase; domain 1 381 492 - -
Lele29g0726 1085 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 969 1056 - -
Lele29g0726 1085 ProSiteProfiles Protein kinase domain profile. 417 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g0726 1085 SUPERFAMILY Protein kinase-like (PK-like) 879 1058 IPR011009 -
Lele29g0726 1085 FunFam receptor-like protein kinase FERONIA 870 973 - -
Lele29g0726 1085 Gene3D Transferase(Phosphotransferase) domain 1 493 704 - -
Lele29g0726 1085 ProSiteProfiles Protein kinase domain profile. 902 1085 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g0726 1085 FunFam receptor-like protein kinase FERONIA 384 492 - -
Lele29g0726 1085 SUPERFAMILY Protein kinase-like (PK-like) 394 687 IPR011009 -
Lele29g0726 1085 CDD STKc_IRAK 430 688 - -
Lele29g0726 1085 FunFam Receptor-like protein kinase FERONIA 493 705 - -
Lele29g0726 1085 Gene3D - 32 185 - -
Lele29g0726 1085 Gene3D Transferase(Phosphotransferase) domain 1 970 1074 - -
Lele29g0726 1085 Pfam Malectin-like domain 58 319 IPR024788 -
Lele29g0726 1085 SMART serkin_6 417 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g0726 1085 ProSitePatterns Protein kinases ATP-binding region signature. 423 445 IPR017441 GO:0005524
Lele29g0726 1085 ProSitePatterns Serine/Threonine protein kinases active-site signature. 537 549 IPR008271 GO:0004672|GO:0006468
Lele29g0726 1085 FunFam Putative receptor-like protein kinase 32 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0726 Lele-ChrLele29 4603198 4609906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0726 790 965 Receptor kinase-like Gene Family AT2G21480 29.703 1.50e-18 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lele29g0726 PK_Tyr_Ser-Thr 2e-44 CL0016