Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0721 ATGGAGGGTATTGTTAGTATGCCGCTGTGTCCGAAGATAGCTTCAGGATCTTCGAAAAGTAACGTATTACCTCTTACGGTTACCATGAACGGGAAGGCCAACGTCTCTAAAGAACTCAACGCTAAGCATAAAAAGATACTGGAAGGACTTCTTAAACTGCCAGAAAATAGGGAATGTGCCGACTGCAAAGCTAAAGGTCCAAGGTGGGCTAGTGTGAACCTGGGCATCTTTATCTGCATGCAGTGTTCAGGAATACATCGAAGTCTTGGGGTACATATTTCAAAGGTTCGTTCTGCAACTCTGGACACCTGGCTTCCAGAGCAGGTTGCATTCATTCAATCCATGGGAAATGAGAAAGCTAATTCTTACTGGGAAGCAGAGCTACCCCCAAATTATGATAGAGTTGGAATCGAGAATTTTATTCGTGCAAAATATGAAGAGAAGAGATGGATTCCGAGGGATGGAAAACTAAAATCACCTTCTAGGCAGCAGGAAGACAGGACTTCTTCAAATTCGCAGAGGCCTGCAGAAAGAAGTGGGCATGGTTATACATCTGCTTCTGATAACACTTTTCATGAAAGGAAGAAAATTCAGGCAACAAATACGATTCCTGCAACAAGAAACAATGTTCCTACTCCTCTAAAAGTACCTGAACAGATAACTCCTGCAAAACCTCAGCATGTAGAGAAAGTGGAACATGTGGCTCCAAAACCGCAAACTGAATCAACTAAACAAGCTACTGACGTGGCTCAGAAAACCCCTCCAAAAGTTGACTATGCTACAGACCTTTTCAACTTGTTATCCATGGATGGATCAAGTGAAAATGGCTCAAAGGAAGCTGGTACTACTACTACTGGCGATGGTACCTGGCAAGGCTTTCAGTCCGCTGCAGAAGCATCGACAACTGAGAAGACTGGTTCCACAAAAGCAGTAGAGAGCACTTCCAAGTCTAATACTGGAATTGAGGATCTATTTAAGGATTCACCTTCAATGACTCCTTTAGTTCCAGAAAAACCACAGAAAGATTTGAAGAATGATATCATGAGCCTCTTTGAAAAGTGCAACATGGTCTCTCCATTTTCTGCGCACCAGCAGCAGCTTGCCATGCTTGCACAGCAACAGTCCCTTCTAATGGCTGCTTCAGCCAACTCTGTTGGCGGGAACCCCAAGTATCCTGGTAATGTACAACAACCTGGACTGAATGGATCCAATATTCCTGTCCCAAGTTGGCCAGCTGCTGGTTACCCAATGCCTGGAGTATTGCCAATGGCTGGTCAGGGAGAGCTGCAGAAACTAATGCAGACTAGGAGCACGACTCCTGCACATCCAGTGTTGAATTCTGTGCAGTATCCAACATCTAGTTTCTACACAATGGGACAGGTTAGACCCGTTAATGGTGTCACAACGACGGGAGTGACTAAAACTCCGCCAGCAGCTTCAATGTCGCCATCAACCTCCTCACCGGCACCAAAGGACTATGATTTCTCCTCTTTAACACAAGGGATGTTTTCCAAACAATGA 1521 0.4484 MEGIVSMPLCPKIASGSSKSNVLPLTVTMNGKANVSKELNAKHKKILEGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNEKANSYWEAELPPNYDRVGIENFIRAKYEEKRWIPRDGKLKSPSRQQEDRTSSNSQRPAERSGHGYTSASDNTFHERKKIQATNTIPATRNNVPTPLKVPEQITPAKPQHVEKVEHVAPKPQTESTKQATDVAQKTPPKVDYATDLFNLLSMDGSSENGSKEAGTTTTGDGTWQGFQSAAEASTTEKTGSTKAVESTSKSNTGIEDLFKDSPSMTPLVPEKPQKDLKNDIMSLFEKCNMVSPFSAHQQQLAMLAQQQSLLMAASANSVGGNPKYPGNVQQPGLNGSNIPVPSWPAAGYPMPGVLPMAGQGELQKLMQTRSTTPAHPVLNSVQYPTSSFYTMGQVRPVNGVTTTGVTKTPPAASMSPSTSSPAPKDYDFSSLTQGMFSKQ 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0721 506 MobiDBLite consensus disorder prediction 164 187 - -
Lele29g0721 506 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 29 506 IPR044520 GO:0005096
Lele29g0721 506 MobiDBLite consensus disorder prediction 198 215 - -
Lele29g0721 506 CDD ArfGap 47 145 - -
Lele29g0721 506 Pfam Putative GTPase activating protein for Arf 45 151 IPR001164 GO:0005096
Lele29g0721 506 Gene3D Arf GTPase activating protein 27 157 IPR038508 -
Lele29g0721 506 PRINTS HIV Rev interacting protein signature 56 75 IPR001164 GO:0005096
Lele29g0721 506 PRINTS HIV Rev interacting protein signature 75 92 IPR001164 GO:0005096
Lele29g0721 506 PRINTS HIV Rev interacting protein signature 96 117 IPR001164 GO:0005096
Lele29g0721 506 SUPERFAMILY ArfGap/RecO-like zinc finger 43 152 IPR037278 -
Lele29g0721 506 MobiDBLite consensus disorder prediction 467 506 - -
Lele29g0721 506 SMART arf_gap_3 44 158 IPR001164 GO:0005096
Lele29g0721 506 MobiDBLite consensus disorder prediction 153 192 - -
Lele29g0721 506 ProSiteProfiles ARF GTPase-activating proteins domain profile. 44 158 IPR001164 GO:0005096
Lele29g0721 506 MobiDBLite consensus disorder prediction 271 339 - -
Lele29g0721 506 FunFam stromal membrane-associated protein 1 isoform X1 29 156 - -
Lele29g0721 506 MobiDBLite consensus disorder prediction 198 217 - -
Lele29g0721 506 MobiDBLite consensus disorder prediction 271 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0721 Lele-ChrLele29 4567373 4576938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0721 44 151 C2H2 Transcription Factor Family AT4G05330 49.138 4.93e-30 118