Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0719 ATGGCGAAAAACAGGAACACAAAAAAGAGAAACGTTGCCGTTTCTATGGATATCAGTGAGCCATCCATTGGGGAAATTCCTCAAGCAATGGACACATCAGAGCCCGGAGCTCAAGGCCCAGTTTCTGGTGCTCCCAGCATGAAGATAAAGAAAGGAAGGCCTATGAAGAGATCAAAAAATGCCCGAAAGATGAAAGCAAGAGAAAAAGCAATATCTGCAAGTGAGAAGACCGCTGAGAAAATATTAAAGAACGAAAGTAAAAAATCAAGAGTTCAATCTGCCAAAGTGCTGGGTGTGCAAAAAGACCCGGTGCGTGGGGGAATTGAAGCGAGTGAGAAAGAAAATATGAGTTTCGGTGTAAGCTACTATGGAAGTCATGGTCTTCCATCTTTTAGAATATCTAACTGCAATATTGCCCGAGATAGCCGTAGCGGAAAATCTGTTGTTCCCATTAACGTGCACAAGAAACTTTCCAAGCCTGAGAATCTTTTCCCATCAAGTTGGAAAGTTGATAGCAGCAGCATGATGGCCGTGATAGGTTCCATGGCAGTGGCCAATCTGATTGCACCAGTTGCTGCGAAGGCTGAAGTGGTTGATTCCGTTTATGCTTTGGCTGATGGAAGCTTGGGTGATTGGTTTGGTGGCTTGCTATATTCAGCCGGACAACAGGCCAACGTAGCTGTTCAAGACCAACTAGCTTCTCTCAACTTCACCAGTTTAGCAGTAATTTATGGGGCAGGGCTTGTTACCAGCCTTTCACCCTGTACACTAAGTGTCTTACCGCTAACTCTTGGTTACATTGGGGCATTTGGGTCTGGCAAGAGCAGGGCAGAGGTTGTTGGCGATTCTGTGGCGTTTTCTTTAGGTCTTGCCACCACATTAGCACTGTTGGGTGTAGCAGCATCAGTTGCTGGAAAGGCTTATGGACAGATAGGCCAAGGACTACCTTTGGCCGCTTCTGGTTTGGCAGTAGTTATGGGTCTGAACCTTCTTGAGATCATTGAATTAAAACTTCCCTCATTTTTTGACAATTTTGATCCTCGCGCAGCAGCTGCCAATTTACCATCAAGTGTGCAAGCATATCTAGCTGGGCTTACATTTGCTCTAGCTGCCTCACCCTGTAGTACGCCTGTGCTGGCTACTATTCTGGGATATGTTGCTGCGTCAAAGGATCCAGTGATTGGAGGTAGCTTACTTTTGACATACACAACTGGTTATGTTTCTCCTTTACTCTTAGCTGCTTCTTTCGCTGGAGCATTACAGAGCCTGCTTTCATTCCGCAAGTTCTCAGCATGGATCAATCCTATGAGTGGAGCACTTTTGTTAGGAGGTGGTCTATACACTTTCTTGGATAGGCTATTCCCAACAACAATGGTGATGTAG 1383 0.4548 MAKNRNTKKRNVAVSMDISEPSIGEIPQAMDTSEPGAQGPVSGAPSMKIKKGRPMKRSKNARKMKAREKAISASEKTAEKILKNESKKSRVQSAKVLGVQKDPVRGGIEASEKENMSFGVSYYGSHGLPSFRISNCNIARDSRSGKSVVPINVHKKLSKPENLFPSSWKVDSSSMMAVIGSMAVANLIAPVAAKAEVVDSVYALADGSLGDWFGGLLYSAGQQANVAVQDQLASLNFTSLAVIYGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAEVVGDSVAFSLGLATTLALLGVAASVAGKAYGQIGQGLPLAASGLAVVMGLNLLEIIELKLPSFFDNFDPRAAAANLPSSVQAYLAGLTFALAASPCSTPVLATILGYVAASKDPVIGGSLLLTYTTGYVSPLLLAASFAGALQSLLSFRKFSAWINPMSGALLLGGGLYTFLDRLFPTTMVM 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0719 460 PANTHER CYTOCHROME C-TYPE BIOGENESIS PROTEIN HI_1454-RELATED 234 459 - -
Lele29g0719 460 MobiDBLite consensus disorder prediction 1 75 - -
Lele29g0719 460 MobiDBLite consensus disorder prediction 50 64 - -
Lele29g0719 460 Pfam Cytochrome C biogenesis protein transmembrane region 244 450 IPR003834 GO:0016020|GO:0017004
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0719 Lele-ChrLele29 4555252 4562753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0719 127 460 Chloroplast and Mitochondria Gene Families AT5G54290 71.552 1.08e-141 408