Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0718 ATGCTTGAATCGCTCCAGCGGAGAGACGAAGAAGAGAATAAGCCAAAGGACTTGCCACCAGCATTGCCAGCTCGTCCGACCTCCAAAGCTCGGCTTCCCTCAGCGAGAAGGTCATTGCCGAATAACTTCAACTTCAAGGTTAATGGAGATCCTGGTGAGACAGAATGCCTTCCGAACGGATTTCATGATGCGAACGAAGAGACTAAGAGGAAAGTTACAGTTGATCTGGGACACAAGAGAAACGGAAGCCTCGAGAGCAAGAAGTTGAAGAGGGATGTGGAATCGCCGTACGCCCTCGCATCAGAAGAGAACCAGAGCGACCAAATATCATCGAGGAGTCGAGAATTCATCTCGGATGATATCGTTACTTATTTCATCAAGAAGAAACTTCATGTTTGGTGTAGGCAACCAAATGGGCACCGAGGGCTAGGAAAGATACAGTCAACTTCAAAAGAAGAAGCTTCAGTTTTACTCACAAATGGAAATGTTATGAAAGTGGCCAGATCAGAGCTCCTACCAGCTAATCCAGATATTTTAAAAGGCGTGGATGATCTCATACAGCTGAGTTATCTGAATGAGCCATCAGTTCTTCACACTCTTCGTTTTAGATATTCTCAAGAAATGATTTATAGTAAAGCAGGACCCATTTTAATAGCACTCAATCCCTTCAAAGATGTCCAGATTTGTGGAAATGATCATGTCACAACTTATAGGCAGAGATGCATGACTAACCCACATGTTTATGCCGTGGCAAATGCAGCTTTTAATGAGATGATGAGAGATAAAGCAAATCAGTCCATCATCATAAGTGGTCAGAGTGGATCTGGGAAGACAGAGACAGCAAAAATCGCTATGCAGTATTTGGCTGCTCTGGGTGGTGGAAGCTGTGGCATAGAAACTAAAGCTCGTCAGACACATTTTATTCTAGAAGCTTTTGGGAATGCAAAAACACCAAGGCATAATAATTCTAGCAGATTTGGGAAGTTAATGGAGATTCATTTCACTGCAGCAGGGAAAATATGTGGAGCTAAAATTCAAACCTTCATGTTACAAAAGTCAAGAGTTGTTCAGCTAACCAGTGGTGAGAGGTCATATCACATCTTTTATCAACTTTGTGCTGGATCTTTACCTGGTCTTAAAGAGAGGCTGAATCTTAGAGAGGCCAGCGAATATAAATATCTTAATCAGAGTGACTGTATGACAATAGATGGCGTTGATGATGCTAAAATGTTTAGTAAGCTGCTGAAAGCTCTGGATGTTGTTCAAATTTGCAAAGAGGATCAAGTGCTAGTATTTAAAATCCTTGCTGCAATATTATGGCTTGGAAATGTATCATTTCAAATATCTGACAATGAAAATCATGTTGTGGTGGTGGATAATGAAGCTGTCACCAGTGCTGCCATGCTGATGGGTTGCAGTCCCCAAGAGTTAACAGTAACTTTATCTACTTGTAAAGTCCAAGCTGGCAAGGATACGGTTACTAAAAGTTTGACATTGAAGCAGGCAACTGAAACAAGAGATGCGTTGGCACAATTTATGTATGAAAGCTTGTTTGGGTGGCTCATGGAAAAAATTAACAAGTCACTTGGAGCTGGCAAACGGCATACTGGGAGATCCATAAATATTCTTGATATTTGTGGGTTTGAGTCATTCAAGAAAAACAGCTTCGAACAATTTTGTGTGAATTATGCAAATGAGAGGCTTCAACAACATTTCATTCGGCAAATATTTAAACTTGAGCAGGAGAACTGCAAAATGGACGGTGTTCATTGGACTAAAGTAGATTTTGAGGACAATCAACAGTGCTTGGATCTATTTGAGAAGAAACCATTAGGAATACTTTCATTGTTGGATGAGGAATCAAATTTGCCCAAGGCCACTGATCTCACGTTTGCCAACAAACTTAAACAGCACCTGAATGCTAATCCTTGCTTTAAAGGGGAAAGAGGGAGGGCTTTTGGTGTTTGTCACTTTGCAGGAGAGGTTTTGTATGATACCAACGGCTTTCTACAGCAGAACAAAGATCTGCTGCCTTCTGATTGCATACAACTCCTGGCATCATGTAGCTGTCAACTGCTGCAGTTGTTCTCGAAAATGCATAGCCAAACACAGAAACAATTGAATTCCTTACAAATGGGTGCATTAGACTCACAGAAGCAGAGTGTTGGTGCAAAGTTCAAGGGTCAATTGTTTGAATTAATGCACCAATTGGAGAACACCACACCTCATTTTATTCACTGCATAAGGCCAAATGCTAAGCAGATTCCTGGGATATTTGATGAAGATCTTGTCATGCAACAACTCCGTTGCCGTGGAGTCTTGGAGTCTCTTATACTTTCAAAGATTGGATATCCTATCCAAATGACGCATGAAGAGTTCGCTGAAAGGTATGGGTTTCTACTTTTTGAGCCCAAAGTATTTCAGGATACATTGAGCATCTCAGTTGCCGTATTACGACAGTTTAATATCCCTCCTGAAATGTATCAGTTTGGCTACACCAAAGTGCATTTGCGAAAAGGGCAGATTGATGCATTGGAGGATAGAAGAAAGCAGGTTATGCAGGGAATACTTCAGGTTCAAAAATGGTTCCGTGGTCATCAAGCCCGTCGATATTTCCATGAACTTAAGAATGGAGTGATGACATTGCAATCATTTGCTCACGGAGAAATTTTGAGGAGGAAATATGGTGTAGTTGAAAAGTCTTCCATGACTGTTCATTGTAAAAATTTTGAGGAGATTGAGGCAATCATACTGCTACAATCAGTAATTCGTGGCTGGTTGGCTAGGAGGAGGAATGCCAGTGGTTTGCATAAGGTGAAGAAACACCCTAATAACGAAAAATTTCAGCGATATTCTCGTGTGAAGATGCTAGATATGAAGGAAGCGTCCAGAGAGCAGGTTCAGAATTTGCCTTCAGCTTTAGAAGAACTCCGAAGGCGGGTACTTAAGGCTGAGGCAACTCTTGAGCAAAAGGAAGAGGAAAATACTGCATTGAGGGAACAGCTGAAACAAAATGAATTAAAATGGATTGAATATGAGGCGAGGATGAAATCAATGGAGGAGACGTGGCAAAAACAGATGGCATCTTTGCAAGTGAGTCTTTCTGCTGCTAGAAAGAGCCTTGCTTCTGACAACACCACTGCTTATCCTGGAAGACAAGAAGCTTTGTCACCTCGTTACAATGATTCTGAAGATTTTAGTTCCATAATATCTCGAACTCCTGGTGGGAGCACACCTATCAAGTTTTCCAGCTCTCTCTCCGTCTCCGATTCTGGAGCGGCAGGAAGAGAAGTTAACGGTACACTTTCTGCAGTCAGCAATCTGATGAGGGAATTTGAACAGAGAAGACAGACTTTTGATTGCGATGTGAGGGCTCTGCTCGATGCCAAGTCCGGGCAGTCTGTTATCATCACGAATCCGGATGAAGAACTTAGGAAACTTAAACATAGGTTCGAGGGATGGAAGAACGAATACAAGTTTAGATTACGGGAGACGAAAGCAAGGCTTCATAAAGTAGGGAATTCAGAAGGGGAAAAGAGCCGTCGGAGATGGTGGGGGAAGTTAAGCTCAAGAGCCTCATAG 3582 0.4196 MLESLQRRDEEENKPKDLPPALPARPTSKARLPSARRSLPNNFNFKVNGDPGETECLPNGFHDANEETKRKVTVDLGHKRNGSLESKKLKRDVESPYALASEENQSDQISSRSREFISDDIVTYFIKKKLHVWCRQPNGHRGLGKIQSTSKEEASVLLTNGNVMKVARSELLPANPDILKGVDDLIQLSYLNEPSVLHTLRFRYSQEMIYSKAGPILIALNPFKDVQICGNDHVTTYRQRCMTNPHVYAVANAAFNEMMRDKANQSIIISGQSGSGKTETAKIAMQYLAALGGGSCGIETKARQTHFILEAFGNAKTPRHNNSSRFGKLMEIHFTAAGKICGAKIQTFMLQKSRVVQLTSGERSYHIFYQLCAGSLPGLKERLNLREASEYKYLNQSDCMTIDGVDDAKMFSKLLKALDVVQICKEDQVLVFKILAAILWLGNVSFQISDNENHVVVVDNEAVTSAAMLMGCSPQELTVTLSTCKVQAGKDTVTKSLTLKQATETRDALAQFMYESLFGWLMEKINKSLGAGKRHTGRSINILDICGFESFKKNSFEQFCVNYANERLQQHFIRQIFKLEQENCKMDGVHWTKVDFEDNQQCLDLFEKKPLGILSLLDEESNLPKATDLTFANKLKQHLNANPCFKGERGRAFGVCHFAGEVLYDTNGFLQQNKDLLPSDCIQLLASCSCQLLQLFSKMHSQTQKQLNSLQMGALDSQKQSVGAKFKGQLFELMHQLENTTPHFIHCIRPNAKQIPGIFDEDLVMQQLRCRGVLESLILSKIGYPIQMTHEEFAERYGFLLFEPKVFQDTLSISVAVLRQFNIPPEMYQFGYTKVHLRKGQIDALEDRRKQVMQGILQVQKWFRGHQARRYFHELKNGVMTLQSFAHGEILRRKYGVVEKSSMTVHCKNFEEIEAIILLQSVIRGWLARRRNASGLHKVKKHPNNEKFQRYSRVKMLDMKEASREQVQNLPSALEELRRRVLKAEATLEQKEEENTALREQLKQNELKWIEYEARMKSMEETWQKQMASLQVSLSAARKSLASDNTTAYPGRQEALSPRYNDSEDFSSIISRTPGGSTPIKFSSSLSVSDSGAAGREVNGTLSAVSNLMREFEQRRQTFDCDVRALLDAKSGQSVIITNPDEELRKLKHRFEGWKNEYKFRLRETKARLHKVGNSEGEKSRRRWWGKLSSRAS 1193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0718 1193 Gene3D Kinesin motor domain 183 776 IPR036961 -
Lele29g0718 1193 FunFam Unconventional myosin-XIX 551 740 - -
Lele29g0718 1193 Pfam IQ calmodulin-binding motif 914 931 IPR000048 GO:0005515
Lele29g0718 1193 Pfam IQ calmodulin-binding motif 856 873 IPR000048 GO:0005515
Lele29g0718 1193 Gene3D Myosin VI head, motor domain, U50 subdomain 424 718 - -
Lele29g0718 1193 FunFam Myosin heavy chain 363 419 - -
Lele29g0718 1193 MobiDBLite consensus disorder prediction 1 18 - -
Lele29g0718 1193 ProSiteProfiles IQ motif profile. 912 941 IPR000048 GO:0005515
Lele29g0718 1193 Coils Coil 960 1008 - -
Lele29g0718 1193 Gene3D - 549 740 - -
Lele29g0718 1193 MobiDBLite consensus disorder prediction 1 52 - -
Lele29g0718 1193 Gene3D - 783 893 - -
Lele29g0718 1193 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 127 176 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lele29g0718 1193 ProSiteProfiles IQ motif profile. 853 881 IPR000048 GO:0005515
Lele29g0718 1193 SMART iq_5 911 933 IPR000048 GO:0005515
Lele29g0718 1193 SMART iq_5 874 896 IPR000048 GO:0005515
Lele29g0718 1193 SMART iq_5 851 873 IPR000048 GO:0005515
Lele29g0718 1193 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 932 IPR027417 -
Lele29g0718 1193 Gene3D - 894 1033 - -
Lele29g0718 1193 MobiDBLite consensus disorder prediction 34 48 - -
Lele29g0718 1193 Pfam Myosin head (motor domain) 182 838 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele29g0718 1193 ProSiteProfiles Myosin motor domain profile. 180 850 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele29g0718 1193 PRINTS Myosin heavy chain signature 592 620 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele29g0718 1193 PRINTS Myosin heavy chain signature 539 567 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele29g0718 1193 PRINTS Myosin heavy chain signature 264 289 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele29g0718 1193 PRINTS Myosin heavy chain signature 307 334 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele29g0718 1193 PRINTS Myosin heavy chain signature 210 229 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele29g0718 1193 PANTHER MYOSIN 173 1185 - -
Lele29g0718 1193 Gene3D - 363 422 - -
Lele29g0718 1193 SMART MYSc_2a 174 851 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele29g0718 1193 CDD MYSc_Myo8 194 838 IPR036022 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0718 Lele-ChrLele29 4534201 4542835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0718 1 1187 Myosins gene family AT5G54280 58.258 0.0 1390