Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0702 ATGAGTCACCATGCATATCATGTCACGGCCACACTGTATACATTGACTTGGGGGACTCAATTATTAGGGTATTCTTTAGGACAAGACTCCAAAGAAGAATGTGATGCCACGCCTTCTTCTGTTTTTGGTCCCCAGCAAAAAAAATCAGAAAATATCTGCTGGGATACCCCCGGTGGCGGTGGAGAAGCTAAGGTGTTTGTGTCCACAAGTAGGCCTACACGATTCGGTGTATTTATTATACGGTATGGAGGAGAGGAAGAGGAAGAAGAAGAAATGGAGGATTGCGCGCTGTGCGGGAAGAAGGCGAGGATGTACTGTGAGTCGGACCAGGCTAAGTTATGCTGGGACTGCGACGACAAGGTTCACGGCGCCAACTTCCTGGTGGCGAAGCACACCAGGGTTCTTCTCTGTCAGACCTGTCAGTCTTTCACTCCATGGAAAGCCTGTGGTCCCAAGCTCACCCCGACTCACTCTCTCTGCCGCCACTGTGCCACCGATTCACACCAGCATCAACGGGAAGAAGATGATCGTGATTATCTTCGTCATGATCTCCGTGAAAATCCTGATCTCGACGAGGAAGAGGAGGAGGAGGATGGAGATTCTAGTTCCGATGCTGACTCTGGTTATGAAGATGACGACGAAGAAGACGAGGGAGAGGGAGAGGACGAGGAGGAGGAAGGAGAGAACCAGGTGGTTCCATGGTCTTGCGCTTCTGCTTCGGGGTCATCGCCGCCTCTAGCAAGCTCTGTTTCAGCTGGTTCTGATATAGCCTGGAAGCGGCGGCGAGCGAGTTCGTTTGTCGATTCCGATGTAACGCAGGATGAGATCGGATGTTCTTCATCTGAAATGCCCTCTGCCTCACAACTACCAGATGATGATTCGTCTTCTTGGAGTATTCTCAGGCCACGGAAGCATCGTAGAACCACTCAGCAGAGCCAAAAACGATTGGTTGGAGATGATGCGCGATGA 969 0.5108 MSHHAYHVTATLYTLTWGTQLLGYSLGQDSKEECDATPSSVFGPQQKKSENICWDTPGGGGEAKVFVSTSRPTRFGVFIIRYGGEEEEEEEMEDCALCGKKARMYCESDQAKLCWDCDDKVHGANFLVAKHTRVLLCQTCQSFTPWKACGPKLTPTHSLCRHCATDSHQHQREEDDRDYLRHDLRENPDLDEEEEEEDGDSSSDADSGYEDDDEEDEGEGEDEEEEGENQVVPWSCASASGSSPPLASSVSAGSDIAWKRRRASSFVDSDVTQDEIGCSSSEMPSASQLPDDDSSSWSILRPRKHRRTTQQSQKRLVGDDAR 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0702 322 MobiDBLite consensus disorder prediction 269 295 - -
Lele29g0702 322 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 95 305 - -
Lele29g0702 322 MobiDBLite consensus disorder prediction 189 229 - -
Lele29g0702 322 SMART bboxneu5 90 136 IPR000315 GO:0008270
Lele29g0702 322 CDD Bbox1_BBX-like 95 136 - -
Lele29g0702 322 ProSiteProfiles Zinc finger B-box type profile. 90 136 IPR000315 GO:0008270
Lele29g0702 322 MobiDBLite consensus disorder prediction 186 322 - -
Lele29g0702 322 Pfam B-box zinc finger 92 135 IPR000315 GO:0008270
Lele29g0702 322 MobiDBLite consensus disorder prediction 233 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0702 Lele-ChrLele29 4454790 4457652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0702 93 282 C2C2-CO-like Transcription Factor Family AT4G27310 40.271 1.47e-33 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele29g0702 zf-B_box 8.1e-08 No_clan