Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0690 ATGGCGGAGGACGAATTTCAAGCAAGTGGAAACTGGTGGGACTCATCTTCAAGAAATGTGAGATTCGAAACGGCTCCTTCCCACTCATCTTCCTTCCCCAATAACTTCACTTGGCAACATCAAATAGATCATCATCATCACGACCACCTCAAGCCTACCTCTGATTCTCCCACCACCATGATCATGGGCTTAGGCCTCTCTTCAAACCCCATCGATTGGCGTAACCAGAATCATCTTCTATCAGAAGAGAAGGGTGTGGTCTCCGATGGCCGATTCAGATCCATGTTTCAAGAGAACAATAATCTGAGTTCTTCAGGAGGAAGCACTAATTTTCATCAGCAAGTTGAGTGGAGAGAGAAGCTCCTGTTTTCAACTGATTCGTCTTCTACTACTACCACTGATAATAATAATCAGTACAGTACCACTTCTGGAGATAGTATAGTGACCACCAGCCATGGCTTAGCTTCTAGTTTCCACATGGACTCATCTGCTAATCCTTCATTATTACAGGGATTGTTATTAGCTTCTGAAACTTCTTCCTCCTTCGACAATAATAATCATCATCATAATCGCTCCTGCTTCAACTTTCCCTATAATAATGATCAGTTAATGCCTTCTTGGCCTAAGGTTTCTCAGTTTCTTAGGGCTTCTTCGCCGCCTAAACAAACACAACATCACGGCGGCGGCGGCGGCGGCAATAGCCAATTGCAGTTTACGAACAACACGACCTTCTGGAACGCTTCTGAAGCTAATCATCATCATGATGCCGCAATTAAAGAACCTACTCGACCTTCCTTCTTCCCTAATTCCTTGCAGGCTCCTTTTCATCAACCGCCGAATTTTGATGCACAATCAAAGAATATTTGTGGAGGAAGAGAAACGAGTAGTGTGGGGAAGAAAAGTGGTGGAGAGACAGCACCAAAAAGAGCTAGAAACGAAACCTCATCGACTTTGCCACCTTTTAAGGTGAGAAAAGAGAAGATGGGGGACCGAATTACTGCTCTTCAACAGCTGGTTTCGCCTTTCGGGAAGACTGATACAGCCTCAGTGCTCTCTGAAGCCATTGAGTATATCAAATTCCTCCACGAACAAGTCTCTGTTTTAAGCAGTCCGTATATGAAAACTGGAGCTCCATTACAGCACCAACAGAGTTCTGGTAAATGTAAGGAAGGTGGTGAAGCCCTAAAACAAGACCTGAGAAGCCGAGGGTTGTGTTTGGTGCCAGTTTCAAGTACATTTCCAGTCACTCATGAAACCACTGTTGATTTTTGGATGCCAACTTTTGGAGCCACTTTCAGATAA 1302 0.4432 MAEDEFQASGNWWDSSSRNVRFETAPSHSSSFPNNFTWQHQIDHHHHDHLKPTSDSPTTMIMGLGLSSNPIDWRNQNHLLSEEKGVVSDGRFRSMFQENNNLSSSGGSTNFHQQVEWREKLLFSTDSSSTTTTDNNNQYSTTSGDSIVTTSHGLASSFHMDSSANPSLLQGLLLASETSSSFDNNNHHHNRSCFNFPYNNDQLMPSWPKVSQFLRASSPPKQTQHHGGGGGGNSQLQFTNNTTFWNASEANHHHDAAIKEPTRPSFFPNSLQAPFHQPPNFDAQSKNICGGRETSSVGKKSGGETAPKRARNETSSTLPPFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSVLSSPYMKTGAPLQHQQSSGKCKEGGEALKQDLRSRGLCLVPVSSTFPVTHETTVDFWMPTFGATFR 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0690 433 Gene3D - 322 385 IPR036638 GO:0046983
Lele29g0690 433 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 135 414 - -
Lele29g0690 433 FunFam Transcription factor bHLH123 family 322 384 - -
Lele29g0690 433 SMART finulus 323 367 IPR011598 GO:0046983
Lele29g0690 433 MobiDBLite consensus disorder prediction 216 238 - -
Lele29g0690 433 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 312 361 IPR011598 GO:0046983
Lele29g0690 433 CDD bHLH_AtbHLH_like 318 369 IPR045239 -
Lele29g0690 433 MobiDBLite consensus disorder prediction 290 318 - -
Lele29g0690 433 MobiDBLite consensus disorder prediction 126 146 - -
Lele29g0690 433 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 322 379 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0690 Lele-ChrLele29 4373049 4375703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0690 236 433 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 62.136 5.95e-69 222