Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0686 ATGAACATGCTTTCTTTCAGAAGCGTCGTTACTTACATACTAGTCCCTTCTCTAATAAGAGTTTCCATGGCAGCTGATTCCATTGCTGTATCTCAAAGCATCTCAGATGGCATGACCTTAGTTTCCCAAGGAGGAATCTTTGAACTGGGATTCTTCAGTCCTGGAATCTCCAACAAACTTTATTTGGGAACATGGTTCAAGAAGATTCCAGTCAGAACCATTGTTTGGGTAGCAAACCGCCAAACCTCAATCAATGCCACTTCTGGAATCCTAATGTTAAATAGGACAGGAAGTCTTGTCCTCCTCAGCCAAAACGGCACCGTCGTTTGGTGTACAAGTACAACAACCCCTCAAAAACAAGCAAAGAAACCAGTGGCTCAGCTTCTTGATTCTGGAAACCTTGTGGTGAAAGATGAAGAAGACGAAAACCCAGAAACCTATCTATGGCAAAGCTTCGATTATCCATCTGATACAATGTTGCCAGGTATGAGGATAGGGTGGGACCTCAGAAATGGTCTGAATAGGCGTTTAACAGCATGGAAGAGTCCAGAAGATCCATCTCCAGGAGATTTTTCTTGGGGCATAGAGATCTATGACTACCCTGAATCAGTTATGAACAAGGGAAATAAAAAGTTCTACAGACCTGGACCTTGGAATGGCCTGTATCAAAGTGGAACTCCAGAACTAAAGCCTAATTCTTTGTTTGATTTCAACTTTGTCTTTGATCAGAATGAGGTTTACTACACTTACACTCTCAGAACTAACTCTTCAGTTTCAATGTTAGTTATGAACCAAACCAGTTATGTTCGTTATCGCTATGTATGGATTGAAACAGATCAAAAGTGGAAGATTTATGCATCACGTCCAGGAGATTACTGTGATACCTATGGCCTATGTGGAGTAAATGGGAATTGTATCATTACTGATTCTCCAGTGTGCCAGTGTTTAAAAGGGTTCAGGCCAAAGTCACCGGAAAAGTGGAACTCGATGGACTGGTCTCAAGGCTGTGTTCATAAGAAACCATTAAGCTGCAAGTTGAAGGAAAAAGAAGATGGGTTTCTCAAAGTGAGTGGCTTGAAGCTTCCAGATACTACAAACACTTGGTTAGATCAGAATATTATTGGGTTAGAGGAATGCAGAAGGAAGTGCTTAAATAACTGTTCTTGCATGGCTTATACAAATTCAGATATTAGAGGCAAAGGAAGGGGTTGTGCCTTATGGTTTGGAGATCTAATTGATATTAGACAAATGCCAGTTGGTGGGCAGGATCTATATATTCGAATGAATGCTTCAGAATTAATTGAAGAGCCAGAACAAGGGCATAAGAAGTTAACAAAGACGGTTATTGCCATCATTGCCATTGCAACTTCAGGGATGCTTTTACTTGGGTGCTTTTGCATCCTCAAAGTCTGCAAAAACAATAACGATAAAGTTAAAAATGCATATCAGGATCAAAACAATGGAAAATATTCTGAAGATTTGGATCTCCCATTGTTTGGCTTATCAACTATTGTCGTTGCCACCGGTAACTTCTCCATTAACAACAAGATAGGAGAAGGTGGTTTTGGACCTGTATATTGGGGAAAATTGGTAAATGGGCAAGAAATTGCTGTGAAGAGGCTTTCAAAGAGTTCTGGACAAGGAACGACTGAATTCAAGAATGAAGTGAAACTGGTGGCAAAACTTCAACACCGGAATCTTGTAAAGCTTCTAGGATGTTGCATTCAAGGAGAAGAAAAAATGCTGGTTTATGAATACATGTCTAATAGCAGCCTAGACGACTTCATTTTTGATGATGCTAAAGGTGAAGTTCTAGATTGGTCCAAACGCTACCATATTATTTGTGGCATTGCTCGAGGCCTTTTATATCTTCATCAAGATTCTAGATTGAGAATTATTCATAGAGACCTCAAGGCAAGTAATGTGTTACTTGATGACATGTTAAACCCAAAGATATCTGATTTTGGAATAGCAAGAACTTTTGGAAGAGGCGATATTGAAGGAAAGACGAATAAGATAGTAGGGACTTATGGCTACATGGCACCAGAATATGCTTTTGACGGGATATTTTCAATAAAATCCGATGTCTTCAGCTTCGGTATTATGCTGCTGGAAATAATATCTGGCAAGAGAAATAGAGGGTTTTTTCATGCAAACCACAGCCAAAACCTCATTGGTCATGCATGGACAAAATGGAAAGAAGGCAAGGCTTTGGAACTAATTGACAAGAACATTGAGGGCTCATGCATTGCATCAGAAGTTCTAAGATGCATTCATGTTAGCCTATTATGTGTTGAAGAACATGCAGAGGATAGGCCTAGCATGTCCTCGGTGGTTCTAATGCTGGCAAGTGAAATGGAGTTGGCTAAGCCTAAGCAACCAGGTTTCTATTTCAGCAAGTTCTCAATGGAAGCAAATTCATCCCAACCAGAATTTGGAACATCCAATGAAATAACCATCACTCAATTAATAGCTCGTTGA 2481 0.3994 MNMLSFRSVVTYILVPSLIRVSMAADSIAVSQSISDGMTLVSQGGIFELGFFSPGISNKLYLGTWFKKIPVRTIVWVANRQTSINATSGILMLNRTGSLVLLSQNGTVVWCTSTTTPQKQAKKPVAQLLDSGNLVVKDEEDENPETYLWQSFDYPSDTMLPGMRIGWDLRNGLNRRLTAWKSPEDPSPGDFSWGIEIYDYPESVMNKGNKKFYRPGPWNGLYQSGTPELKPNSLFDFNFVFDQNEVYYTYTLRTNSSVSMLVMNQTSYVRYRYVWIETDQKWKIYASRPGDYCDTYGLCGVNGNCIITDSPVCQCLKGFRPKSPEKWNSMDWSQGCVHKKPLSCKLKEKEDGFLKVSGLKLPDTTNTWLDQNIIGLEECRRKCLNNCSCMAYTNSDIRGKGRGCALWFGDLIDIRQMPVGGQDLYIRMNASELIEEPEQGHKKLTKTVIAIIAIATSGMLLLGCFCILKVCKNNNDKVKNAYQDQNNGKYSEDLDLPLFGLSTIVVATGNFSINNKIGEGGFGPVYWGKLVNGQEIAVKRLSKSSGQGTTEFKNEVKLVAKLQHRNLVKLLGCCIQGEEKMLVYEYMSNSSLDDFIFDDAKGEVLDWSKRYHIICGIARGLLYLHQDSRLRIIHRDLKASNVLLDDMLNPKISDFGIARTFGRGDIEGKTNKIVGTYGYMAPEYAFDGIFSIKSDVFSFGIMLLEIISGKRNRGFFHANHSQNLIGHAWTKWKEGKALELIDKNIEGSCIASEVLRCIHVSLLCVEEHAEDRPSMSSVVLMLASEMELAKPKQPGFYFSKFSMEANSSQPEFGTSNEITITQLIAR 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0686 826 SMART serkin_6 511 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g0686 826 CDD STKc_IRAK 517 782 - -
Lele29g0686 826 ProSiteProfiles PAN/Apple domain profile. 344 429 IPR003609 -
Lele29g0686 826 SMART ntp_6 348 428 IPR003609 -
Lele29g0686 826 SMART blect_4 31 155 IPR001480 -
Lele29g0686 826 CDD B_lectin 31 155 IPR001480 -
Lele29g0686 826 Gene3D - 19 152 IPR036426 -
Lele29g0686 826 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 21 773 - -
Lele29g0686 826 Pfam PAN-like domain 344 414 IPR003609 -
Lele29g0686 826 PIRSF SRK 1 826 IPR024171 GO:0004674
Lele29g0686 826 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 152 - -
Lele29g0686 826 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 587 790 - -
Lele29g0686 826 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 474 586 - -
Lele29g0686 826 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Lele29g0686 826 Pfam S-locus glycoprotein domain 213 323 IPR000858 GO:0048544
Lele29g0686 826 SUPERFAMILY Protein kinase-like (PK-like) 495 802 IPR011009 -
Lele29g0686 826 ProSiteProfiles Protein kinase domain profile. 511 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g0686 826 ProSiteProfiles Bulb-type lectin domain profile. 25 149 IPR001480 -
Lele29g0686 826 CDD PAN_AP_plant 341 427 - -
Lele29g0686 826 Pfam D-mannose binding lectin 73 181 IPR001480 -
Lele29g0686 826 Gene3D Transferase(Phosphotransferase) domain 1 587 794 - -
Lele29g0686 826 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 186 IPR036426 -
Lele29g0686 826 Pfam Protein tyrosine and serine/threonine kinase 512 780 IPR001245 GO:0004672|GO:0006468
Lele29g0686 826 Gene3D Phosphorylase Kinase; domain 1 485 586 - -
Lele29g0686 826 ProSiteProfiles EGF-like domain profile. 289 325 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0686 Lele-ChrLele29 4308734 4311899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0686 448 796 Receptor kinase-like Gene Family AT4G23230 55.840 6.44e-127 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele29g0686 PK_Tyr_Ser-Thr 2.1e-49 CL0016