Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele29g0679 | ATGATGTCAAAGTCGTATACAAATCTTCTTGATTTGGCTTCAGGGAATTTCCCAGCAATGGGCAAGGAACCTAAGGAACGAAGGCGGATGCCAAGGGCTATGAGTGTTCCTGGGATGATCTCAGAACTTGATGATACTCTCAGTGTTTCTTCTGATAATCCATCAGCTGCTTCCAATGACCGGATTATCATTGTTGCAAATCAGCTTCCTTTGAAAGGAAAGCGAAAAGATGACAACAAAGGATGGAGTTTCAGTTGGAATGAGGATTCATTGCTTTTACAACTAAAGGATGGTTTTCCGGAAGATACGGAGGTTCTTTATGTTGGGTCACTACGGGTTGATGTTGATCCTGCTGAACAGGATGATGTATCACAGTATTTGTTAGAAAAATTCAACTGTGTTCCTACTTTTCTGCCCCCTGATGTACTGGAAAGATTTTATGATGGATTTTGCAAACGGCAGTTATGGCCACTGTTTCACTACATGTTACCACTTTCAACTGATAAAACCCAGCGCTTTGACCGCTCTTATTGGGAAGCCTATGTGTTGGCAAATAAACTTTTCTTTCAGAAGGTAGTTGAAATAATTAGCCCAGAGGATGATTATATTTGGATTCATGATTACCATCTGATGGTTCTGCCAACCTTTATAAGGAGGCGCTTTAACAGGGTCAAAATGGGATTTTTCCTTCATAGTCCCTTTCCATCATCAGAGATATACAAGACTCTTCCTGTGAGGGAAGAGATACTAAAAGCTTTGCTTAACTCTGATATCATTGGTTTTCACACCTTTGATTATGCTCGCCATTTCCTTTCTTGTTGCAGTCGAATGTTGGGCCTGGAGTATCAGTCAAAGAGGGGCTACTTAGGATTGGAATATTATGGAAGGACTATCAGTATAAAGATTATGCCAGTAGGAGTTCACATGGGTCGAATTGAATCAGTTATGAAAATGACAGATGAGGAGAGTAAGGTTAGGGAACTCAAACAAAAATACGAAGGAAAAACAGTGCTGCTTGGTGTTGATGATCTGGACATTTTTAAAGGAATTAATTTGAAGATTTTGGCTATGGAGCAGATGCTCTTACAACATCCTAAATGGCAAGGAAGAGCAGTGCTGATACAGATTGTAAATCCACCTAGGGGCGGAGGGATACATCTAGATGAAATCCGAGATGAGATACAAGAATGCTGCAGCAGGATCAACGGAGTATTTGGGCGGACTGGTTACCAACCGATTGTTTTTATTGATAGATCAGTTCCAATTACTGAAAAAGTTGCATATTACAGGATTGCTGAGTGTGTAGTTGTTACAGCTGTAAGGGATGGAATGAACCTAACTCCTTATGAATATATTGCTTGTAGACAGGGAATATCTGATTCCGAGTCATGTTCTGATGTTAGTGGATTGAAGAAGAGTATGCTTGTAATATCAGAATTTATTGGGTGTTCTCCATCACTTAGTGGGGCTATCCGTGTCAACCCCTGGAACATTGAAACAACTGCAGAAGCCATGAACGAGGCCATCTCAATGAGTGATGAAGAGAAACAGTTGCGGCATGAAAAGCATTATCGGTATGTTAGCACTCACGATGTGGCTTATTGGTCACGCAGTTTCTTGCAAGATATGGAGAGGGCTTGTGCAGACCTTCTGAGGAAAATATGTTGGGGAATAGGGCTTAGTTTTGGATTCAGAGTTGTGGCACTTGACCCCAATTTTAGAAAGCTCTCAATCAATGCTATAGTCTCAGCTTACAAGAGGGCAAGGAGCAGGGCCATTTTGTTGGATTACGATGGTACTGTAATGCCACAGACCTCCATTACTAAGAGTCCTACTCAGGTGGTCATCTCCACCTTGAACACGCTATGTGCAGACCCCAAAAATGCAGTTTTCATTGTTAGTGGAAGGGGGAGGGATAGCTTAAGCAAGTGGTTTACTCCCTGTGAAAAGCTTGGTATTGCAGCAGAACATGGGTACTTCTTGAGATGGCCTCAAAGTGAAGAATGGGAAATTTGCGGTAAGAGCTCCGAATTTACATGGATGCAGATTGCTGAACCTGTAATGAAACAATATACAGAAGCAACTGATGGTTCTGGCATTGAAAAAAAGGAAAGTGCTTTAGTCTGGCAATATAGGGATGCAGACCTTGGTTTTGGATCTTCTCAGGCTAAGGAAATGTTAGATCATCTCGAGGGTGTTTTGGCCAATGAGCCTGTTGCTGTGAAGAGTGGTCAGTTCATTGTTGAAGTAAAGCCCCAGGATGTGAGCAAAGGATTAGTTGCAGAAAAGATCTTTTCAACAATGGATGAAAGAGGTAGACAAGCTGACTTTGTGTTGTGTGTTGGTGATGACAGATCAGATGAGGACATGTTTGAAATAATTAGTGGTGGAATGCCAAGAAATATTCTTTCTGCCAACTGTTCAGTATATGCTTGCACGGTTGGACAAAAACCCAGCAAAGCGAAGTATTATGTGGATGATACTACTGAAGTAATAAGCATGCTAGAATCTTTGGCTGAAGAGTCAAAGGAGGATAAAAGCCCTTGA | 2547 | 0.415 | MMSKSYTNLLDLASGNFPAMGKEPKERRRMPRAMSVPGMISELDDTLSVSSDNPSAASNDRIIIVANQLPLKGKRKDDNKGWSFSWNEDSLLLQLKDGFPEDTEVLYVGSLRVDVDPAEQDDVSQYLLEKFNCVPTFLPPDVLERFYDGFCKRQLWPLFHYMLPLSTDKTQRFDRSYWEAYVLANKLFFQKVVEIISPEDDYIWIHDYHLMVLPTFIRRRFNRVKMGFFLHSPFPSSEIYKTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGVHMGRIESVMKMTDEESKVRELKQKYEGKTVLLGVDDLDIFKGINLKILAMEQMLLQHPKWQGRAVLIQIVNPPRGGGIHLDEIRDEIQECCSRINGVFGRTGYQPIVFIDRSVPITEKVAYYRIAECVVVTAVRDGMNLTPYEYIACRQGISDSESCSDVSGLKKSMLVISEFIGCSPSLSGAIRVNPWNIETTAEAMNEAISMSDEEKQLRHEKHYRYVSTHDVAYWSRSFLQDMERACADLLRKICWGIGLSFGFRVVALDPNFRKLSINAIVSAYKRARSRAILLDYDGTVMPQTSITKSPTQVVISTLNTLCADPKNAVFIVSGRGRDSLSKWFTPCEKLGIAAEHGYFLRWPQSEEWEICGKSSEFTWMQIAEPVMKQYTEATDGSGIEKKESALVWQYRDADLGFGSSQAKEMLDHLEGVLANEPVAVKSGQFIVEVKPQDVSKGLVAEKIFSTMDERGRQADFVLCVGDDRSDEDMFEIISGGMPRNILSANCSVYACTVGQKPSKAKYYVDDTTEVISMLESLAEESKEDKSP | 848 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele29g0679 | 848 | SUPERFAMILY | HAD-like | 591 | 839 | IPR036412 | - | |
| Lele29g0679 | 848 | Gene3D | - | 719 | 847 | IPR023214 | - | |
| Lele29g0679 | 848 | Gene3D | - | 590 | 703 | IPR023214 | - | |
| Lele29g0679 | 848 | Pfam | Trehalose-phosphatase | 594 | 828 | IPR003337 | GO:0003824|GO:0005992 | |
| Lele29g0679 | 848 | CDD | GT20_TPS | 61 | 544 | IPR001830 | GO:0003824|GO:0005992 | |
| Lele29g0679 | 848 | TIGRFAM | HAD-SF-IIB: HAD hydrolase, family IIB | 593 | 794 | IPR006379 | - | |
| Lele29g0679 | 848 | Pfam | Glycosyltransferase family 20 | 61 | 544 | IPR001830 | GO:0003824|GO:0005992 | |
| Lele29g0679 | 848 | CDD | HAD_TPP | 592 | 831 | - | - | |
| Lele29g0679 | 848 | PANTHER | TREHALOSE-6-PHOSPHATE SYNTHASE | 31 | 840 | IPR001830 | GO:0003824|GO:0005992 | |
| Lele29g0679 | 848 | FunFam | Alpha,alpha-trehalose-phosphate synthase | 315 | 528 | - | - | |
| Lele29g0679 | 848 | Gene3D | Glycogen Phosphorylase B; | 53 | 314 | - | - | |
| Lele29g0679 | 848 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 54 | 313 | - | - | |
| Lele29g0679 | 848 | TIGRFAM | T6PP: trehalose-phosphatase | 588 | 839 | IPR003337 | GO:0003824|GO:0005992 | |
| Lele29g0679 | 848 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 590 | 707 | - | - | |
| Lele29g0679 | 848 | Gene3D | Glycogen Phosphorylase B; | 315 | 528 | - | - | |
| Lele29g0679 | 848 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 60 | 547 | - | - | |
| Lele29g0679 | 848 | FunFam | Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 720 | 848 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele29g0679 | Lele-ChrLele29 | 4251434 | 4254541 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele29g0679 | 1 | 843 | Trehalose Biosynthesis Gene Families | AT1G06410 | 75.385 | 0.0 | 1333 |