LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele29g0671	ATGAAAGTTCCTTGGAAGGCCTTCTCGTCCTTCCAATTCACTTTGTTCCTATTGTTGTTTCTCTTAGCTTGTTGTTGGAAATTTGAGGTATGTTATGGACAAGCACAAACCGATTACAACAACGGTGGCGGTGGCCGCGACGACGGCGAGACGACAAAGAGACCGAAGGAGCTTGACAACTGCAACGGGATCTTCTTGACGTACAACTTTCAGGGAAGGACCAAGGAGTTTCCTCATGTGAAGAACGTATCGAAGCAGGCTTGGGCGTTTGAGGCAGATGCGTCGTTGACCAACGTCGGCGACGAGGAGGTGGTGGGGTGGAATATGTTCATTGGGTTCCAGCACAATGAGATTTTAGTGTCCGCAGATGGCGCTGTGCTCCTCGACGCCGGCGACTTCCCGGCGAACGTGAGCAACGGAACGACGTTGGCGGGAAGCGCCATGACGGACTTGAGGACGGCCATTGATACGGCGAACGATTTTGATCAAATGTCGGTTAATATTAAGTTCAAAGGTACCATGTTTGGCGTCAAATCAGGAACAACTCCGATGCCCAAGACTATCAAACTGGTTAACGATGGCTTCAAGTGCCCCGCTGCAACTAGAAGACGGTCGAACATGTTTGTGTGCTGCAAGAAGGACCCCAAGGCGACGGTGCTGAATAAGAGGAGGACGAAATTCCCTCCACGGCGGTACGGCGACATAACCATTAGCTACGACGTGATTCAGGCAACCAAGAACAATTACTATGCCCAGGTCACCGTCGACGCGTGGCACCCACTCGCCCGCCTCGATCACTGGAACATTTCATGGGAATGGCAGAAAGGTGAGTTCATCAGCTCCATGAAAGGCGTTTACACCCACATGAGAGACATCTCCCAGTGCCTCTACGGCACCGCCGGAAAATTCTACGCTGACTTTAACTTCAACCAGCAAGGTGTTGACTGCGACAAAACCCCCATCCTCTCCGACCTCCCCGCCACCCTCAAGGACGACGACAAGCTCGGGAAACTCCCCTTTTGCTGCCGCAATGGCACAATCTTACCTCCGTCACTGGACCCGAGCCAAGCTCGATCCATCTTCCAGATCAACGTCATGAAGATGCCGCCTGATAACGGCATGGCCACTGCCATTACTCCTCCTTTGAAGTGGCGCATCGACGGCGTAGTCAACCCGGTGTACAGGTGTAGCACACCCATCCGGGTCTCCCCACAAGAGTTCCCCGACCCGAGTGGACTTAATGCCGTCACCCTCGCCGTCGCCAGCTGGCAGGTTGCCTGTAATATGACGAAGCCTAAGCCCAAGCAGAACCGTTGCTGTGTATCGTTCTCTGCCTACTACAACGACTCTGTAATCCCATGCAACACATGTGCATGTGGTTGTCCCGATACTAGAAAGTGTGATCCCGACGCCAAGTCGTTGCTTCTTCCACCGGAAGCACTTCTCATTCCGTTCGTTAACAGAACAGCGAAGGCCAAAGCCTGGGCTGCTTTGAAGCACCATAGAATACCCAGAAAGCTTCCTTGTGGAGATAACTGTCCGGTGAGCATAAACTGGCATGTTAACTCTGACTCCATCTCCTGGTGGACGGCGAGGATGACGATCTTCAACTGGGAAGACAGCGCTTTCGAGGACTGGTTCGCGGCAATCTCGTTCAAGAGGTCGTACCCTACTTTCGAGAAGGTCTTCTCCTTCAACGGAACCAAGGTGGATAACTTAAGCACAGTGATTTTCAATGGCTTAAAGGATATGAATTACTTGGTGGGAGAGACGAACGGGACACATCCGTACGACCCGAGGGTGCCCGGGAAACAGCAATCAGTGATGACGTTTAACAAGAAGAACATTAAGGATTTTGATATAAGAAAAGATGGGTTTCCGACTAAGGTGTACTTCAACGGCGAGGAGTGCGCTATTCCTCCTTATGTACCGACGCATAGCTCAGGGCATCGCGAAGCTTCTTCTTCTTCCATAGTTGCAGTCATTTTGGTAGCGTTGGTGACATTCTTAATGACGACGACGACGACGAGTTCTTGGGAAAATCGCTATTACTTGTGA	2058	0.516	MKVPWKAFSSFQFTLFLLLFLLACCWKFEVCYGQAQTDYNNGGGGRDDGETTKRPKELDNCNGIFLTYNFQGRTKEFPHVKNVSKQAWAFEADASLTNVGDEEVVGWNMFIGFQHNEILVSADGAVLLDAGDFPANVSNGTTLAGSAMTDLRTAIDTANDFDQMSVNIKFKGTMFGVKSGTTPMPKTIKLVNDGFKCPAATRRRSNMFVCCKKDPKATVLNKRRTKFPPRRYGDITISYDVIQATKNNYYAQVTVDAWHPLARLDHWNISWEWQKGEFISSMKGVYTHMRDISQCLYGTAGKFYADFNFNQQGVDCDKTPILSDLPATLKDDDKLGKLPFCCRNGTILPPSLDPSQARSIFQINVMKMPPDNGMATAITPPLKWRIDGVVNPVYRCSTPIRVSPQEFPDPSGLNAVTLAVASWQVACNMTKPKPKQNRCCVSFSAYYNDSVIPCNTCACGCPDTRKCDPDAKSLLLPPEALLIPFVNRTAKAKAWAALKHHRIPRKLPCGDNCPVSINWHVNSDSISWWTARMTIFNWEDSAFEDWFAAISFKRSYPTFEKVFSFNGTKVDNLSTVIFNGLKDMNYLVGETNGTHPYDPRVPGKQQSVMTFNKKNIKDFDIRKDGFPTKVYFNGEECAIPPYVPTHSSGHREASSSSIVAVILVALVTFLMTTTTTSSWENRYYL	685

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele29g0671	685	ProSiteProfiles	Prokaryotic membrane lipoprotein lipid attachment site profile.	1	24	-	-
	Lele29g0671	685	Pfam	COBRA-like protein	249	430	IPR006918	GO:0010215\|GO:0016020
	Lele29g0671	685	PANTHER	COBRA-LIKE PROTEIN 7	12	671	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele29g0671	Lele-ChrLele29	4210982	4213154	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele29g0671	1	671	COBRA Gene Family	AT3G20580	54.586	0.0	735