Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0665 ATGAGAAGAAATATCAATAATTCTGCTCTCTCATCTGAGTCTCGCAGAACTGGTGTTATAGCCTCTGGTTACCATATTCCCATCGATAGAGACTCTTTCGAGGCGCCTGCGTTCTCCCGGTCTCCTTCTACACGTACTGCTCCTCCTCAGATGACACCAAGTCCACTGAATCCTGTGTGGTATATGGCAGATAGAAGGCAAGCAGGGCTCTACAGCATACCTGAAAGTGACTCTTACGAGGTGCCTGTGTTCTACCAAGCTTCTTCGAGACATGCCACTCCCGTACAGACGACACCAATTCCACAGAATCCTCCGTGGTATCAGGCAGATAGAAGGCATGCAGGACTCTACAGCATACCTGATGACTCTTATGAGGTGCCAGTGTTCTACCGAAATTCTTCTAGACAAGCCACTCCTTATTTCCAGGATGAGAGAACATCAAATGTAGGGAACCATCCTCGGTTTCTGGAAGACAGTTTTCCAGCACAATCGCACATTCTCAATAGAGATACAGGAATGGGATTCAACTCCAGGCTCAGAGAAACTCACCAACCATCAGTTCCGCCTCGAACATTCGCACGCCAATCAGACACACAAGCTCCAACGGCTCTGGAAAATCCCAGATCTAGAGCATTGAGCAAGCTGAAGAAAGAAATCTACGAACCGAACATTCCAACTTCAAAGATGCTAGCGAAGAAATTGAGCTTCTATTACAGAGACTCAAAAAGTGTGAATGCCTTGAAGGATATGGAGAACAAGGAAAAGAACGAAGACGGAAAGAGTTGTGCGGTGTGCTTAGAGGATTTCGTGCCGAAACAGGAGGTAATGGTGACGCCTTGCAAGCACATGTTTCATGAGGATTGTATAATGCCATGGCTGAGAAGCCAAGGTCAGTGTCCGATCTGTAGATTCGTGATCTGCGAGAAAGAGAGGGAGAATCCAATGCCGTTGAACGACGATGATGTTGGCACCAGTTACCTAATAGCAGGGGAGCTTCTGTCAATTGTGAGGGCCATGGAAGAAGCCTTCCGATTGGATCCCGAAACTCACTGA 1053 0.4729 MRRNINNSALSSESRRTGVIASGYHIPIDRDSFEAPAFSRSPSTRTAPPQMTPSPLNPVWYMADRRQAGLYSIPESDSYEVPVFYQASSRHATPVQTTPIPQNPPWYQADRRHAGLYSIPDDSYEVPVFYRNSSRQATPYFQDERTSNVGNHPRFLEDSFPAQSHILNRDTGMGFNSRLRETHQPSVPPRTFARQSDTQAPTALENPRSRALSKLKKEIYEPNIPTSKMLAKKLSFYYRDSKSVNALKDMENKEKNEDGKSCAVCLEDFVPKQEVMVTPCKHMFHEDCIMPWLRSQGQCPICRFVICEKERENPMPLNDDDVGTSYLIAGELLSIVRAMEEAFRLDPETH 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0665 350 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 135 304 - -
Lele29g0665 350 FunFam RING/U-box superfamily protein 246 320 - -
Lele29g0665 350 MobiDBLite consensus disorder prediction 181 206 - -
Lele29g0665 350 MobiDBLite consensus disorder prediction 35 55 - -
Lele29g0665 350 Pfam Ring finger domain 261 303 IPR001841 -
Lele29g0665 350 ProSiteProfiles Zinc finger RING-type profile. 262 303 IPR001841 -
Lele29g0665 350 SMART ring_2 262 302 IPR001841 -
Lele29g0665 350 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 246 319 IPR013083 -
Lele29g0665 350 SUPERFAMILY RING/U-box 252 310 - -
Lele29g0665 350 CDD RING-H2_PA-TM-RING 262 303 - -
Lele29g0665 350 MobiDBLite consensus disorder prediction 181 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0665 Lele-ChrLele29 4165155 4167921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0665 206 343 C3H Transcription Factor Family AT3G58720 47.222 3.04e-38 135