Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0655 ATGTTGGTATATAGTAGATCAGATCTAGAGATGTCGTTATCTTTGGTTTTGCCTGCTAAAGGGGGATTCACAGACACTCGACAATTTCATCTTAAATGGAAGGCTTTTGACACGAATGGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGTCAGGCAAAACACGGTTGCAGGTTAAGTTACTGCGTGGATTTGCCGTCAATCTTCAGTTCAAAGTCCAAAATCGATGAGAGATTCGGTTGGAGTTTTTAGCGTTTGCATTTGCCCGAAGCTTATGCATTGCCTTATGGTGCAAGGAAATTTCAGTTAGTTCAGAAGATTCTGAAGAAACACGGGAAGATTTCCTTTGCCAACTGCTTGACCCCACCTCTGGATTGTTGGATGAGGATACGATACAGCAATTACGGACCACCTGCTCTGTGGATTTGATTCAGTTGAAGGAAGAAGTAAGAAATCTTGACTCATGCTTTCCACATGAATCATCATCCAGTTGCACCAATGATATTGGTTCAGAGACTCAATTATTAGCACGAGAAAACATCCAAAAATTGATTAATGCTTGCCATCCTCAGTTGAAGCAAATATTTCTTCACTGTTTGAGAAAGAATAATCTTCCATTCCGACGTGTATCCAGTGATGAAAATTATGATTCCAGATCCGATGATCCTAGAAGAAATCTGGGTCTGGGCTTGCCTCAACACAAATCAAAACCACCTGGTCCTGGCCCCGCACTTAAATCATATATCCACACTCAAGAACCGCAACCTCCACTGCTGAAGAAATCTGGATCTTTACCTTCAAAAAGGGAAAGTCCCGCAATGGTGATGTTTGCGAAAGAGAAAAAAGATAAGAAAAGTGATAATAACATGGTTATAATTGCTGTTGCTGCAGCTGGCGCGTTAGTGACGCTACTAGTGGTACTGCTCTGTGTTTTGTTTTGTTGTTGTGGTGATAGCCAAGTTAGAAAATATGACGAGAGGCCCCTTCTCAGTGTGAGCAGGAGCGATTACTCTTCGACAGGTTCTTTTTCTCCAAAATATTCTTCTGGAAATTCAGTAAGAGAACAGAAATTTGGGTTTCAAGATAATAATTCAATTGACCACAAAAGGACCTCATCTCTTAATGGCAATTTTACTGTTGGATCTGATGCGCAGGAAACTCCTACACCAGCATTTGCCGGTACTGATGCTGCTGCCAGACCATCATTTGACCTAAAGCCTCCTCCTGGTAGGGTGGGAATCAGCCCTTTGAAACCTCCACCTGGAAGGCCAGATCTCCTTCCCCATGAACCACCTTCTAGTAATTCCGCTACTCCTGCTCCTCCTCCTCCTGCTCCTCCTCCACCCCCACGACCACCCAAACCTGCTGCGGGACCTCCCCCTCCACCACCACCGGCACTACCTGGTGCCAAAAAAGGTGCAGGTGCACCACCACCACCGCCCCGTCAGAGTGGTAATGGTCCAGGTCCTCCTCGACCACCTCCACCAATGGGTGGTGTAAAGGGTCGTGGACCTTTAGTTATACATAAAAAAGCGAGAGCTGCAGAATCTGGAGCTGCTGATTCAGAAAGTGGTGCTACTAAAGCTAAGTTAAAACCGTTTTTTTGGGATAAGGTTCAAGCCAACTCAGATCAAACCATGGTTTGGAATCAGCTTAAAGCAGGATCGTTCCAGGTTGACGAAGAAATGATGGAGTCGCTTTTTGGCTATGCCAATGCAGATAAAAACAAACCAACCAAGAAAAGATCTGCCTCTGTAGAACAGGCACCTCAGTTTATCCAGATCATTGACTCAAAGAAAGCACAAAATTTGTCAATTCTATTGCGAGCTTTGAATGTGACTATGGAAGAAGTTTCTGATGCACTCAACGAAGGAAATGAGCTTCCCTCAGAATTTATCCAATCCTTGCTAAAGATGTCACCCACATCTGAGGAAGAACTTAAGCTCAGACTTTTCAATGGCAACCTAGCTCAACTTGGGCCTGCTGACCGGTTTCTGAAAGCCCTTGTTGATATTCCATTTGCTTTTAAACGAATGGAATCACTTCTTTTTATGGGTACTCTTCAAGAGGAGCTCACCTTCACCAAGGATGCCTTTGCAGTTTTAGAGGTTGCTAGTAAAGAACTAAAAGGTAGCCGGCTGTTCCTGAAGCTTCTAGAAGCTGTTCTCAAAACTGGTAACCGTATGAATGATGGAACATTCCGTGGTGGTGCACAAGCATTTAAACTTGATACCCTTCTCAAACTGTCTGATGTTAAAGGAGTAGATGGCAAAACTACACTCTTACACTTTGTTGTCAAAGAGATAATCCGATCTGAGGGCATAAGAGCAGTTCGTGCAACGAAAGAGAGCAAGAGTTTCTCTAGCATCAAAACAGAAGACCTGTATGAGGAAGTCTCCACCGAATCCGAAGAGCGGTATCGTGAACTTGGTCTTCAAGCGGTATCTCGATTGAGCAGTGAGATTGAGAATGTGAAGAAAGCAGCAGCACTAGATGCTGATGCTTTAACAGGAACAACTGCAAAATTTGGGTATTCTCTCTTGAAAACCAAAGAATTCTTAAACAGAGACCTTAAGGAGTTAGAAGAAGAAAGTCAAAAAGGAGGGTTTCATCAGACAGTGGAGTGTTTTGTGGAAAATGCTGAAGGTGCTATCATGAGTCTGCTGGAAGAAGAGAAGAGGATCACAGCTTTGGTGAAGAGTACAGGTGACTACTTCCATGGAAACACTGGGAAGGATGAAGGGTTACGACTGTTTCAGATCGTACGAGACTTCTTGGTCATACTGGATAAGGTATGCAAGGAGGTTGGAGAAGAACAGAAGAAGGCGGCAGCAGCAAAAGCACCTCCAAAACAAGAGCCTCCTAATCCTAAGCCTCCTCCTCCTGAAGCTCGCCCACCCCCACACAAGAAGCTTCTTTCAGGGTTATCGGATAGGAGGATGGATGACTTTAGTTCAGATGATGACAGTCCGTAG 2985 0.4439 MLVYSRSDLEMSLSLVLPAKGGFTDTRQFHLKWKAFDTNGDVAQMVERSLSMRESGKTRLQVKLLRGFAVNLQFKVQNRXEIRLEFLAFAFARSLCIALWCKEISVSSEDSEETREDFLCQLLDPTSGLLDEDTIQQLRTTCSVDLIQLKEEVRNLDSCFPHESSSSCTNDIGSETQLLARENIQKLINACHPQLKQIFLHCLRKNNLPFRRVSSDENYDSRSDDPRRNLGLGLPQHKSKPPGPGPALKSYIHTQEPQPPLLKKSGSLPSKRESPAMVMFAKEKKDKKSDNNMVIIAVAAAGALVTLLVVLLCVLFCCCGDSQVRKYDERPLLSVSRSDYSSTGSFSPKYSSGNSVREQKFGFQDNNSIDHKRTSSLNGNFTVGSDAQETPTPAFAGTDAAARPSFDLKPPPGRVGISPLKPPPGRPDLLPHEPPSSNSATPAPPPPAPPPPPRPPKPAAGPPPPPPPALPGAKKGAGAPPPPPRQSGNGPGPPRPPPPMGGVKGRGPLVIHKKARAAESGAADSESGATKAKLKPFFWDKVQANSDQTMVWNQLKAGSFQVDEEMMESLFGYANADKNKPTKKRSASVEQAPQFIQIIDSKKAQNLSILLRALNVTMEEVSDALNEGNELPSEFIQSLLKMSPTSEEELKLRLFNGNLAQLGPADRFLKALVDIPFAFKRMESLLFMGTLQEELTFTKDAFAVLEVASKELKGSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGVDGKTTLLHFVVKEIIRSEGIRAVRATKESKSFSSIKTEDLYEEVSTESEERYRELGLQAVSRLSSEIENVKKAAALDADALTGTTAKFGYSLLKTKEFLNRDLKELEEESQKGGFHQTVECFVENAEGAIMSLLEEEKRITALVKSTGDYFHGNTGKDEGLRLFQIVRDFLVILDKVCKEVGEEQKKAAAAKAPPKQEPPNPKPPPPEARPPPHKKLLSGLSDRRMDDFSSDDDSP 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0655 994 SUPERFAMILY Formin homology 2 domain (FH2 domain) 463 948 - -
Lele29g0655 994 MobiDBLite consensus disorder prediction 942 994 - -
Lele29g0655 994 SMART it6_source 524 947 IPR015425 -
Lele29g0655 994 MobiDBLite consensus disorder prediction 214 283 - -
Lele29g0655 994 Pfam Formin Homology 2 Domain 527 931 IPR015425 -
Lele29g0655 994 MobiDBLite consensus disorder prediction 415 503 - -
Lele29g0655 994 Gene3D Formin, FH2 domain 530 959 IPR042201 -
Lele29g0655 994 PANTHER FORMIN-RELATED 217 975 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lele29g0655 994 MobiDBLite consensus disorder prediction 975 994 - -
Lele29g0655 994 ProSiteProfiles Formin homology-2 (FH2) domain profile. 524 958 IPR015425 -
Lele29g0655 994 MobiDBLite consensus disorder prediction 953 971 - -
Lele29g0655 994 MobiDBLite consensus disorder prediction 344 392 - -
Lele29g0655 994 MobiDBLite consensus disorder prediction 344 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0655 Lele-ChrLele29 4090602 4098230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0655 490 985 FH2 protein (formin) Gene Family AT5G54650 62.475 0.0 592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0758 09 5964024 5965781 Lele29g0655 29 4090602 4098230 CCT
Lele10g0688 10 5198252 5200012 Lele29g0655 29 4090602 4098230 CCT
Lele29g0655 29 4090602 4098230 Lele19g0436 19 2497703 2498164 hybridization
Lele29g0655 29 4090602 4098230 Lele32g0637 32 3977113 3982019 hybridization