Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0648 ATGGAGTTAGGAAACTCACCTAATTCCTCCTTTTCTAATAATCACTTTGATTCTGATTCTCTTTCAACATTGAGTGACAACCAGGATAATAATAAATACAGTTATGGTGAGATCCTTTCTGGTGCGAGCCCTTCTTGTGATTCTTCGCTGGAAACCAATCACAATTGGCACAATTCAACGCCGTCCATGGATTTTCGCCAAGATGGACCTCGTCCATATTCTTCTAGGAGCTCTCTTCTAAATGATGTGAATTGCAGCCAGAAAATCAGACATGTTCTGCACGAAATAGAATCAACTCTAATGGCCCCTAAGAATGGTAATGATGCCACCTCATCAAATAGCCCGTTAGTGACTTCTGGCCGTAGAAACATATCTTGGAGTCATCATGACCAAGGTTTACAGAATTTTCAAACTTGGCCATCTTTTGCTTCTAGTAGTAGTCAGCAGTTGAGCGAAGCTGCACAAGCAGAGAAACGTCACAAAGCAATAATAGAGGAAGAACTGGTGCAAGGTTTTGCACCAACAAGTAATTTGAGACAGTTGTTGATTACATGTGCGAAAGAGCTTTCGGAAAACAACCTGAAAGATTTTGGTCAGTTGATTGAAAGGACTAGGAGTTCTGTGTCCATTACCGGCGAGCCAATCCAAAGGCTCGGTGCTTATTTGGTAGAAGGGCTTGTTGCAAGGAAGGAGGCATCCGGGAACAACATTTGTCGTTCTCTCAAGTGCAAAGAGCTGGAAGGAAAAGACTTGCTCTCCTATATGCACGTGCTGTATGAAATCTGCCCATACTTGAAATTCGGTTACATGGCCGCGAATGGATCCATCGCAGAAGCTTGCAGAAACGAGGACCGTATTCACATCATAGACTTTCAGATTGCTCAGGGAACTCAGTGGGTGACTCTGCTTCAAGCCCTTGCAGCAAGACCTAGTGGGGCTCCTTATGTTAGGATCACAGGCATTGACGATCCTCTTTCTAAATACGCTCGTGGCGATGGGCTAGAGGCGGTTGGGAAACGGTTGGCCATGATCTCTGAGAAATTTTACATACCAGTTGAGTTTCATGGATTGCCAGTTTTTGGTCCTGATGTGACCCGGGACATGCTTGACATCCGGCTCGGCGAGGCTTTGGCCGTGAACTTTCCTTTACAGCTCCATCATACAGCTGATGAAAGTGTTGATGTGAATAATCCGAGGGATGGTCTTCTGAGAATGGTGAAATCATTATCTCCAAAGGTGGTCACATTGGTGGAACAGGAATCAAACACCAACACAACTCCTTTCTTCAACAGGTTCATAGAAACTTTGGATTACTACTTGGCAATGTTTGAGTCCATCGATGTCAAGCTCCCGAGAGACAACAAGGCGAGGATTAACGTGGAGCAACATTGTTTGGCAAGGGATGTTGTGAATGTCATTGCTTGCGAAGGGAAGGGAAGGATAGAGCGACACGAATTGTTTGGAAAGTGGAAGTCAAGGTTGACAATGGCGGGTTTTCGACAATATCCGATGAGCACATACGTAAATTCTGTTATTCGGAGCTTGCTGAGATACTATTCAGAGAATTATACATTAGTGGACAAGGATGGTGCTATGTTGTTGGGTTGGAAGAATAGAAATCTGATATCAGCCTCAGCATGGCATTGA 1647 0.4432 MELGNSPNSSFSNNHFDSDSLSTLSDNQDNNKYSYGEILSGASPSCDSSLETNHNWHNSTPSMDFRQDGPRPYSSRSSLLNDVNCSQKIRHVLHEIESTLMAPKNGNDATSSNSPLVTSGRRNISWSHHDQGLQNFQTWPSFASSSSQQLSEAAQAEKRHKAIIEEELVQGFAPTSNLRQLLITCAKELSENNLKDFGQLIERTRSSVSITGEPIQRLGAYLVEGLVARKEASGNNICRSLKCKELEGKDLLSYMHVLYEICPYLKFGYMAANGSIAEACRNEDRIHIIDFQIAQGTQWVTLLQALAARPSGAPYVRITGIDDPLSKYARGDGLEAVGKRLAMISEKFYIPVEFHGLPVFGPDVTRDMLDIRLGEALAVNFPLQLHHTADESVDVNNPRDGLLRMVKSLSPKVVTLVEQESNTNTTPFFNRFIETLDYYLAMFESIDVKLPRDNKARINVEQHCLARDVVNVIACEGKGRIERHELFGKWKSRLTMAGFRQYPMSTYVNSVIRSLLRYYSENYTLVDKDGAMLLGWKNRNLISASAWH 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0648 548 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 141 544 IPR005202 -
Lele29g0648 548 Pfam GRAS domain family 178 547 IPR005202 -
Lele29g0648 548 ProSiteProfiles GRAS family profile. 169 548 IPR005202 -
Lele29g0648 548 MobiDBLite consensus disorder prediction 1 28 - -
Lele29g0648 548 MobiDBLite consensus disorder prediction 44 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0648 Lele-ChrLele29 4058566 4060212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0648 177 547 GRAS Transcription Factor Family AT5G48150 62.903 9.78e-170 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele29g0648 GRAS 9.2e-124 CL0063