Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0637 ATGTTTGTATTCCAAACCCGGACCCATGTGCTTCCCTCTGTTGGCTCGAGATCAGTTGGGCAGCCACCCAGCTCCTGCGCTGTGTCTCTTAAACCTCCGAAAAGCCCTCTGCCCGTTTCATACCCGGTTAAACCTAAAGACCCGTCACCTCCAGATGCTACTGAATCCTCCGAAGCTCAATTACAAAATCAATCGCTGGCGCCAACCCCTCCTCGTCGTCCAGGTGGACCGACATTGGCGGAAGATACCGAGGAATCACGGCGGGCTTGGACCAGGCAAGAGATTCGGTATGTAAAGGACTCGCCTTCTATATCTCCCGTGTCATATCCTTTGCGAGTGGCGCCACTTCCTGAAGATAAGACTACTGCTGGTGCTGAAGCAGTGAAGGATGATGGCGTGAATGCGAACGAAGAAATTGAGAAGGAGACTAGAAAAATTAGGGTGGATGATCAGTTAAAGGGGAGAGTTATTAGAGCTGCAGAAGAGGAGAAGTTGCGAGTTCCTTTTCCAACTCTGATAAAGGTGAAGCAAAAGGAGAAGCCGCCTATCCTTGATTTGACGGAGGCAATCCGCCAACTTAAGATTAATATATACACGGGATCAGTTGAGTTGCGTTGGGGTGATATTTCTCTTACTCAATATTGCTTCAATCATAAATATGTTGATGGAAAGGCCAATGCAAAGGCAAAATTTGATGAAACTGTTGAAGTGCATGTAAGATTGGGTATTGAATCAAAGCGAACAGAACTGGAATATTCTGATCCAATCACTTCACTTGCAGTTCGTGGTACTATGACACTGCCGCATGGTGTGCCTAAGGTTGTCAGTGTGGCTGTGTTTGCAGAAGGAGCTGACGCAGAGGAAGCTAGAGCTGCAGGAGCTGATATAGTTGGTGGTAAAGAGCTTATTGAGGAGATTGCTAATGGTAATAACAAGCTTAGAGTTGACAAGTGCTTCTCAACTCCAGGAATGGCACCTCATCTTGGAAAGCTAGGTACTCTGACCAGTGATATTCCTGGGCAGTTGAAAGAGCTAAGACGGGGTCGTGTTGAGTTTAAAATGGAGATTAAATCAATTGTGCCTGCTGGAGTCGGAAAGGTAAGCTTCAGAGAGGATCAATTACGTGAAAACATAGGTGCATTCATGAATGCTCTATTGGTTGCCAAGCCTGCTGGCTTAAAGAAGACTTCAAAATATGCCGGGTATGTCCTATCTGTCAATATGTGCAGCACGGTGAGCTCATAA 1245 0.4635 MFVFQTRTHVLPSVGSRSVGQPPSSCAVSLKPPKSPLPVSYPVKPKDPSPPDATESSEAQLQNQSLAPTPPRRPGGPTLAEDTEESRRAWTRQEIRYVKDSPSISPVSYPLRVAPLPEDKTTAGAEAVKDDGVNANEEIEKETRKIRVDDQLKGRVIRAAEEEKLRVPFPTLIKVKQKEKPPILDLTEAIRQLKINIYTGSVELRWGDISLTQYCFNHKYVDGKANAKAKFDETVEVHVRLGIESKRTELEYSDPITSLAVRGTMTLPHGVPKVVSVAVFAEGADAEEARAAGADIVGGKELIEEIANGNNKLRVDKCFSTPGMAPHLGKLGTLTSDIPGQLKELRRGRVEFKMEIKSIVPAGVGKVSFREDQLRENIGAFMNALLVAKPAGLKKTSKYAGYVLSVNMCSTVSS 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0637 414 Gene3D - 225 412 - -
Lele29g0637 414 MobiDBLite consensus disorder prediction 1 94 - -
Lele29g0637 414 CDD Ribosomal_L1 225 411 IPR028364 -
Lele29g0637 414 MobiDBLite consensus disorder prediction 53 69 - -
Lele29g0637 414 PANTHER 54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL 103 194 - -
Lele29g0637 414 SUPERFAMILY Ribosomal protein L1 224 396 IPR023674 -
Lele29g0637 414 Pfam Ribosomal protein L1p/L10e family 224 411 IPR028364 -
Lele29g0637 414 Gene3D - 270 348 IPR016095 -
Lele29g0637 414 MobiDBLite consensus disorder prediction 1 25 - -
Lele29g0637 414 MobiDBLite consensus disorder prediction 35 49 - -
Lele29g0637 414 MobiDBLite consensus disorder prediction 78 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0637 Lele-ChrLele29 3939883 3943859 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0637 29 3939883 3943859 Lele31g0903 31 16440198 16450483 hybridization
Lele29g0637 29 3939883 3943859 Lele32g0621 32 3881247 3885416 hybridization