Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0633 ATGAATTATCGGAAGATCGCTCTAAGTACCAACATGGCTGAGAGTGAGAGATCAATTTACTTGTCCGACAAAAACAAGAACGAAGATAGTAACAACAACAACATTAGAGCCAAACCCTCTTCATCGTTTTCTTCTTCTCTGCTTGGTCAAAAGGGTTCGTTGTTTGACCTGAACGAAGAAGCCATGGACGGTCTTGGTGGCGACGTTAATGGAGGATCGTCGTCGTCGTCGTTCTCATCGTGGGGAGAAGGTAATGTGAGTAGCAACAACTCAAGTTCAGAAGTGAAAGAGAGAACAACAACAAGTAGTGTGAGGCAATATGTGAGATCCAAAATGCCAAGGCTTCGTTGGACTCCTGATCTCCATCTTGCTTTTGTTCGTGCTGTAGAAAGACTTGGTGGACAGGAAAAAGCAACGCCCAAGTTAGTATTACAGTTGATGAATGTGAGAGGACTTAGCATTGCGCATGTTAAGAGCCATTTGCAGATGTATCGAAGCAAGAAACTTGATGAGTCTGGCCAAGTTTTATCCCAAAATAAGGCAGCATTATTGCAAGGACAAAGACATCGTATTTTGAATATGTACGAAAGATTTAGTACTCATCAAGGACGACACTTTGGAATTGATGGCTATGATCTCCCAACATCACCTGTCGTTATGAAGCCAATGTTCGACTTCAAATCCCATGGCTCTTCAAGATTTCATCCAGGGACAAGATCAAGTTCATCAGTAGTATATGAGGTTGGTAAAGACAGAACGAGGATGATTCAGAGGAACAAGAAAATTATTGGAGGGTGTAACCTAATTGAGGTTAACGATGAGACTAATATTAGAATAAGAAATGGACCTCTTAGGCCTAACCTATTTGTGGAAGACAAGAAATGGCCTCCTCGTGAAAGAAATGACAAACCTTATTGGGATGACAAACATTGTCCATGGAACCCCACAAATTGCTTTATCAATAATAGTAACCTTCAACATGAACCAACCCACCTCCACTTTAATGCCCAGGTTCATCATGAACAAAAAGATGTGACGCTACATTTCATCAGAAATCAGAATCATCATTTATCAGAAGCAGCAGGTGAAGTTAAAGGTCAAGTAGAGAGTTATTTGAATGAGAAGAAGGAACCCCCCAGTTTTCTAAAGCCATGTTTAACCCAAGATTCTTCGAATAATAATGTTGCAGAAGTGAACAAGCCTGGTCCTCCAGGTAATGATGGAGGAATCAATACGATGTTGTCTCTCTCCTTGTAA 1257 0.4097 MNYRKIALSTNMAESERSIYLSDKNKNEDSNNNNIRAKPSSSFSSSLLGQKGSLFDLNEEAMDGLGGDVNGGSSSSSFSSWGEGNVSSNNSSSEVKERTTTSSVRQYVRSKMPRLRWTPDLHLAFVRAVERLGGQEKATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDESGQVLSQNKAALLQGQRHRILNMYERFSTHQGRHFGIDGYDLPTSPVVMKPMFDFKSHGSSRFHPGTRSSSSVVYEVGKDRTRMIQRNKKIIGGCNLIEVNDETNIRIRNGPLRPNLFVEDKKWPPRERNDKPYWDDKHCPWNPTNCFINNSNLQHEPTHLHFNAQVHHEQKDVTLHFIRNQNHHLSEAAGEVKGQVESYLNEKKEPPSFLKPCLTQDSSNNNVAEVNKPGPPGNDGGINTMLSLSL 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0633 418 Gene3D - 112 169 - -
Lele29g0633 418 FunFam Myb family transcription factor 111 169 - -
Lele29g0633 418 SUPERFAMILY Homeodomain-like 111 167 IPR009057 -
Lele29g0633 418 MobiDBLite consensus disorder prediction 22 46 - -
Lele29g0633 418 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 113 168 IPR006447 GO:0003677
Lele29g0633 418 MobiDBLite consensus disorder prediction 388 418 - -
Lele29g0633 418 MobiDBLite consensus disorder prediction 69 106 - -
Lele29g0633 418 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 109 169 IPR017930 -
Lele29g0633 418 MobiDBLite consensus disorder prediction 25 46 - -
Lele29g0633 418 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 90 227 - -
Lele29g0633 418 MobiDBLite consensus disorder prediction 65 106 - -
Lele29g0633 418 Pfam Myb-like DNA-binding domain 115 165 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0633 Lele-ChrLele29 3907222 3909551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0633 71 196 G2-like Transcription Factor Family AT2G42660 54.545 4.50e-37 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele29g0633 Myb_DNA-binding 4.5e-07 CL0123