Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0631 ATGGAAGCGTGGTCACATGGACTCCAGCTTCAAGACATGGATGAGAGACGAAATGATGCAAGGCCCGCAGAACAAGGGCCATCAAACTCTTCATGGTGGCCATCAGACTTTGTTGAAAAATTAGGATCTGTTTCTCTGCGTTCTCAAGAAGAGACCTTAAATAACAAAGTATCACCTAGACATTTTGAGCAAGATGTTTTGTCACCTCATAAAGCATCACAAATTCTCTGGCGTACTGGAATGCTTTCAGAACCAATACCAAATGGTTTTTATTCAGTCATTCCTGATAAAAGGCTCAAGGAATTTTTTGATGATATTCCTACCATGGATGAGATTCATGCTTTGGGTGCAGAGGGTCTAAAGGCTGATGTCATTTTGGTGGACACGGAGAAAGATAAAAAAGTTTCTATGTTGAAGCAATATATCGTGGCCCTAGTTAAAGGACTGAACTCAAATCCAGCTGCGATAATAAAAAAGATAGCTGCACTAGTTTCTGATTTTTATAAGCGATCAAATGTGGAAAGTCCAGCAAAAGCTGCACTAGAGGAAACCTCCCACATGTTTGAGAATCGAGGTGCCCAGATACTGGGACAAGTAAAGAATGGTTCATGCCGTCCTCGAGCAATCTTATTTAAAGTGTTAGCAGATACTGTAGGTCTTGAAAGTAGGCTTGTAGTGGGTTTGCCAAATGATGCGGTTGTTGAATGTGTGGACTCATACAAGCATATGTCAGTGATTGTTGTATTAAATTCTGTGGAACTGCTGGTTGATCTCATGCGATGCCCTGGTCAATTATTACCTCGATCAAACAAGGCAATTTTCATGACACATATTTCTGCAGCAGGAGAGAGTGATTCTGCAGAAAATGATTCCTGTGATTCACCACTAGAACCAAACAGCCCTTTATATGGGGTTTCAGAGAAAGTGGATCCTGATAGTGCTGAAACAGAGGAGAACCTCCTTTTCCAGAGGAGATTTGACATTCCTTCAAATGTATCAGGCCTTTCTTTGCGAAATTTGATGTTACGGTCAAATACCAGTCTGGATAGGAAATTGAGTTTTTCTCATAGTGAACCCAATATTGCAATTGCATTTGGTCGGTGTAGTCGGAGAAAGGTCATTGCTGAACAGAGGACAGCTAGTTCCAGTCCAGAGCATTCATCATTTAAAGCACATGGACGGTCCATTCTTAGTGGTGATAGGAAAGCATTCAGAGACTTTGCTGATGATGAGGCTGCATCAAGGTCAGATAGTGCATCTTCATCAGAAGCTCGTAGGATTAGAAGAAGAAGCATCAGCATTACACCTGAGATTGGTGATGATATCGTAAGGGCCGTACGTGCGATGAATGAAACACTGAAGCAGAATCGTCTTTTGAGAGAGCAAGGGGATAATAGCTCAACAAATAGCGTGGGGGACATTCAGAAAAATGTATGTCTGCATTATTGTATGTCAAATTTCCACCGAGATGGTCATGAGGGATCTAATTCGAATTCTCTTCCACCTGATCAAGTAAATTCCCAAAAAGCAATGTCATTACCCTCTTCACCGCATGGTTACAGAGGTCAGACATCTGAGAGAAGTGGACTATCAAGATATGGAGTGAACGAATTGCAGTCAACATGGAATAAAATCCTCGAATCTTCAATGTTTAGTAATAAACCCCTCTTACCATATGAAGAATGGAATATTGACTTCTCAGAAATAACTGTTGGAACCCGTGTTGGGATTGGGTTTTTCGGAGAAGTCTTCCGTGGTGTATGGAATGGCACTGACGTTGCAATCAAGGTTTTTCTGGAGCAAGATTTAACTGCTGAAAACATGGAAGATTTCTGCAATGAGATATCAATTCTCAGCCGGCTTCGACATCCAAATGTAATTTTATTTCTTGGGGCGTGCACAAAGCCTCCGCCCTTGTCGATGGTTACTGAGTACATGGAAATGGGATCACTGTATTACTTGATCCATTTGAGCGGCCAAAAGAAGAAGCTTAGCTGGCGGAGAAGACTGAAGATGTTGCGAGATATATGCAGGGGGCTGATGTGCATACACCGAATGAAGATAGTTCACCGAGACCTGAAAAGTGCAAATTGTCTTGTGAATAAACATTGGACTGTGAAGATCTGTGATTTTGGGCTTTCAAGGATCATGACAGAGGCCAGTATCAAAGACGCTTCATCGGCCGGAACTCCAGAATGGATGGCCCCTGAACTTATTCGGAACGAACCATTCAATGAAAAGTGTGATATATTTAGCCTTGGGGTGTTGATGTGGGAGCTTTGTACTTTGAGCAGGCCTTGGGAAGGTATCCCACCAGAAAGGGTGGTTTATGCTGTTGCTAACAAGGGATCTAGACTGGAGATTCCTGAAGGCCCGTTGGGCAAGCTCATTGCAGATTGTTGGGCAGAACCAAATGAACGACCAAGTTGTGAGGAGATCCTGTCTCGCTTGCTTGATTGCGAGTACTCAATGTGCTGA 2478 0.4266 MEAWSHGLQLQDMDERRNDARPAEQGPSNSSWWPSDFVEKLGSVSLRSQEETLNNKVSPRHFEQDVLSPHKASQILWRTGMLSEPIPNGFYSVIPDKRLKEFFDDIPTMDEIHALGAEGLKADVILVDTEKDKKVSMLKQYIVALVKGLNSNPAAIIKKIAALVSDFYKRSNVESPAKAALEETSHMFENRGAQILGQVKNGSCRPRAILFKVLADTVGLESRLVVGLPNDAVVECVDSYKHMSVIVVLNSVELLVDLMRCPGQLLPRSNKAIFMTHISAAGESDSAENDSCDSPLEPNSPLYGVSEKVDPDSAETEENLLFQRRFDIPSNVSGLSLRNLMLRSNTSLDRKLSFSHSEPNIAIAFGRCSRRKVIAEQRTASSSPEHSSFKAHGRSILSGDRKAFRDFADDEAASRSDSASSSEARRIRRRSISITPEIGDDIVRAVRAMNETLKQNRLLREQGDNSSTNSVGDIQKNVCLHYCMSNFHRDGHEGSNSNSLPPDQVNSQKAMSLPSSPHGYRGQTSERSGLSRYGVNELQSTWNKILESSMFSNKPLLPYEEWNIDFSEITVGTRVGIGFFGEVFRGVWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPPLSMVTEYMEMGSLYYLIHLSGQKKKLSWRRRLKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIMTEASIKDASSAGTPEWMAPELIRNEPFNEKCDIFSLGVLMWELCTLSRPWEGIPPERVVYAVANKGSRLEIPEGPLGKLIADCWAEPNERPSCEEILSRLLDCEYSMC 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0631 825 FunFam Serine/threonine-protein kinase isoform 1 559 647 - -
Lele29g0631 825 SMART serkin_6 569 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g0631 825 ProSitePatterns Protein kinases ATP-binding region signature. 575 596 IPR017441 GO:0005524
Lele29g0631 825 Pfam Protein tyrosine and serine/threonine kinase 570 817 IPR001245 GO:0004672|GO:0006468
Lele29g0631 825 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 382 817 - -
Lele29g0631 825 CDD STKc_MAP3K-like 575 817 - -
Lele29g0631 825 Pfam Ethylene-responsive protein kinase Le-CTR1 71 265 - -
Lele29g0631 825 SUPERFAMILY Protein kinase-like (PK-like) 542 817 IPR011009 -
Lele29g0631 825 Gene3D Phosphorylase Kinase; domain 1 562 647 - -
Lele29g0631 825 MobiDBLite consensus disorder prediction 1 34 - -
Lele29g0631 825 MobiDBLite consensus disorder prediction 492 527 - -
Lele29g0631 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 688 700 IPR008271 GO:0004672|GO:0006468
Lele29g0631 825 Gene3D Transferase(Phosphotransferase) domain 1 648 824 - -
Lele29g0631 825 MobiDBLite consensus disorder prediction 285 309 - -
Lele29g0631 825 ProSiteProfiles Protein kinase domain profile. 569 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0631 Lele-ChrLele29 3878619 3888753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0631 13 825 MAP Kinase Kinase Kinase AT3G58640 70.538 0.0 1174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Lele29g0631 PK_Tyr_Ser-Thr 4.1e-62 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0786 09 6205539 6208630 Lele29g0631 29 3878619 3888753 CCT
Lele10g0714 10 5439644 5443197 Lele29g0631 29 3878619 3888753 CCT
Lele29g0631 29 3878619 3888753 Lele31g0911 31 16509495 16516605 hybridization
Lele29g0631 29 3878619 3888753 Lele32g0615 32 3817959 3827265 hybridization