Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0625 ATGCGTCCTCCAATCAGGAAGATCGACTTTTACAGGGGCCAAGGAGTCGAAGTCTCCGTCAAGGAAGACGGATTTCATGGATCCTACTTCGAAGCCAAGGTCGTTTCTCGACTCGACAATGGCCTCTACGTCGTCCGGTACGAGACCTTGCTCGAAGACGACAACGAGACCCAGTTTCTGACGGAAACTGTGTACCCGAAGGAGCTTCGTCCTCTTCCTCCGGACATCCCTGCTCGCCGGTTTTCTGTTAACCAGAAGGTCGATGCCTTCGACAACGACGGTTGGTGGCTCGGCGTTATCACCGGAAAAGATGGGCCTGACAGTTATTTTGTGTATTTCGCGCCCACGAACCAGGAGATCGCTTACCCTCTCTCTCAGCTTAGGGTTCATCAGGATTGGATCAACGGCAAGTGGGTTTTGCCCAAGAAAGTTCACTCCTAG 441 0.5283 MRPPIRKIDFYRGQGVEVSVKEDGFHGSYFEAKVVSRLDNGLYVVRYETLLEDDNETQFLTETVYPKELRPLPPDIPARRFSVNQKVDAFDNDGWWLGVITGKDGPDSYFVYFAPTNQEIAYPLSQLRVHQDWINGKWVLPKKVHS 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0625 146 SMART agenet_At_2 8 77 IPR014002 -
Lele29g0625 146 SMART agenet_At_2 79 135 IPR014002 -
Lele29g0625 146 Pfam Agenet domain 13 74 IPR008395 -
Lele29g0625 146 Gene3D - 2 82 - -
Lele29g0625 146 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 12 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0625 Lele-ChrLele29 3815191 3815631 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0625 22 133 PHD Transcription Factor Family AT5G58610 29.323 1.30e-10 56.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0625 29 3815191 3815631 Lele31g0917 31 16580289 16580738 hybridization
Lele29g0625 29 3815191 3815631 Lele32g0610 32 3766505 3766942 hybridization