Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0602 ATGGCGGGACCTATTCTTCGTTCTCTCTGGTCCTCTACCAGAAAATCTTTTTCCTCTTCGCCGTCCCTTTTCACCCCATATCATTTATTGCCGCGAACCAACACCGGTTCCCGCGCCTTCTCCGCCGCGCCAGCTACCGCCGCCGCCGAACCCAGCAGCGCCCTCAACCCCAGCCGCCTCCGCAACGTCGCTGTGATTGCTCATGTTGACCATGGCAAGACCACCCTCATGGATCGACTGCTTCGTCAGTGTGGCGCCGACATACCCCACGAGCGCGCCATGGATTCCATCAGTCTGGAGCGCGAGCGTGGTATCACGATCGCTTCGAAGGTTACATCGGTTTCATGGAATGAAAATGAGCTAAATATGGTTGATACACCTGGACATGCAGATTTTGGTGGTGAAGTTGAACGAGTCGTTGGTATGGTCGAGGGAGCAGTATTGGTTGTAGATGCTGGTGAAGGCCCACTTGCACAAACAAAATTTGTTCTGGCAAAAGCCTTAAAGTATGGGTTACGACCTCTTCTTCTTTTGAACAAAGTAGACCGACCTTCAGTCTCTGAGGAGAGATGTAATGAAGTCGAGAGTCTGGTGTTTGATCTTTTTGCCAACCTTGGTGCAACAGAGGAGCAATTAGACTTTCCAGTTCTTTATGCTTCTGCTAAAGAAGGATGGGCATCCACTACCTTTACCAAGGATCCTCCTGCTGATGCAAAAAATATGTCACAACTACTTGATGCCATTGTAAATCATGTCCCACCACCAAAAGCAGACATTGATACGCCTTTCCAAATGCTGGTTTCAATGATGGAACGGGATTTCTATCTTGGGCGAATTTTGACTGGACGTATTCATTCTGGGATTGTTCGTGTAGGTGACAAGGTTCATGGTTTATCTAACAAAGATTCTGGAGTAGTGAAGATTGAAGATGGAAAGGTTGTGAAATTAATGAAAAAGAAGGGTACAAGCATGGTTCCAATTGATTGTGCTGGAGCTGGTGATATTATTTCAATGGCTGGGTTGGCGAGACCAATAATAGGCAACACAGTAGCAACTGCGGAGATTATGTCTGCATTACCCACAATTGAGCTGGATCCTCCAACAATTTCCATGACTTTTGGTGTAAATGACTCTCCTTTAGCTGGTCGTGATGGTACTCATTTGACTGGAGGAAAAATTGGTGATCGGCTGATGGCTGAAGCTGAAACAAACATTGCCATAAATGTGCTTCCAGGCATTTCAGAATCATATGAAGTTCAGGGAAGAGGAGAGCTACAATTGGGTATCCTTATTGAGAATATGAGGCGCGAAGGATTTGAATTGTCTGTATCTCCACCTAGAGTCATGTATAAAACTGAAACTTGTGAGAAACTTGAGCCGATTGAAGAAGTTACAATTGAGGTAAATGATGAGCACGTTGGGTTAGTTATGGAGGCCTTATCTCATAGGCGAGCTGAAGTTATGGACATGGGTCCTGTCTCAGGAGCTGTTGGTCGGACTAGGTTGTCTTTGACTTGTCCATCAAGGGGCCTGGTTGGTTATAGGAGTGTGTTCAGCAGTGACACACGTGGAACTGGCTTCATGCACCGTGCTTTCCTTAAGTATGAAAAATTTCGAGGTCCTCTTGGCAATGTCAGGAAAGGTGTATTGATATCAATGGGTTATGGTACAATTAGAGCTTATGCATTAATGAGCTTAGAAGCGCGTGGGACTTTATTTATATCCCCAGGAATGGAGACATACGATGGGATGATTATCGGCGAACACTCGCGAGACACAGATCTTGACGTCAATCCAGTGAGAGCTAAGGAACTTACAAATATTCGTGCTGCTGGCTGTGATGAAAATATCAAGCTGTCTCCTCCTCGCCTTATGACCCTTGAAGAAGCCATAGGATATGTAGCTTCAGATGAGCTTATCGAGGTGACTCCAAAGGCTATACGGTTGAGGAAGAAATATCTTGATGTGAACAAGCGTAAAAGCATGAGTAAAAAGCCAAAGGAATGA 2007 0.4564 MAGPILRSLWSSTRKSFSSSPSLFTPYHLLPRTNTGSRAFSAAPATAAAEPSSALNPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVTSVSWNENELNMVDTPGHADFGGEVERVVGMVEGAVLVVDAGEGPLAQTKFVLAKALKYGLRPLLLLNKVDRPSVSEERCNEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASTTFTKDPPADAKNMSQLLDAIVNHVPPPKADIDTPFQMLVSMMERDFYLGRILTGRIHSGIVRVGDKVHGLSNKDSGVVKIEDGKVVKLMKKKGTSMVPIDCAGAGDIISMAGLARPIIGNTVATAEIMSALPTIELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGDRLMAEAETNIAINVLPGISESYEVQGRGELQLGILIENMRREGFELSVSPPRVMYKTETCEKLEPIEEVTIEVNDEHVGLVMEALSHRRAEVMDMGPVSGAVGRTRLSLTCPSRGLVGYRSVFSSDTRGTGFMHRAFLKYEKFRGPLGNVRKGVLISMGYGTIRAYALMSLEARGTLFISPGMETYDGMIIGEHSRDTDLDVNPVRAKELTNIRAAGCDENIKLSPPRLMTLEEAIGYVASDELIEVTPKAIRLRKKYLDVNKRKSMSKKPKE 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0602 668 CDD TypA_BipA 60 255 - -
Lele29g0602 668 CDD BipA_TypA_C 459 539 IPR035651 -
Lele29g0602 668 Pfam Elongation factor Tu domain 2 277 350 IPR004161 GO:0005525
Lele29g0602 668 SUPERFAMILY Translation proteins 205 361 IPR009000 -
Lele29g0602 668 CDD BipA_III 367 444 - -
Lele29g0602 668 Gene3D - 450 544 - -
Lele29g0602 668 SUPERFAMILY EF-G C-terminal domain-like 459 575 IPR035647 -
Lele29g0602 668 Gene3D bipa protein 545 660 IPR042116 -
Lele29g0602 668 Pfam Elongation factor G C-terminus 457 540 IPR000640 -
Lele29g0602 668 Gene3D - 58 256 IPR027417 -
Lele29g0602 668 PRINTS GTP-binding elongation factor signature 174 183 IPR000795 GO:0003924|GO:0005525
Lele29g0602 668 PRINTS GTP-binding elongation factor signature 102 110 IPR000795 GO:0003924|GO:0005525
Lele29g0602 668 PRINTS GTP-binding elongation factor signature 122 132 IPR000795 GO:0003924|GO:0005525
Lele29g0602 668 PRINTS GTP-binding elongation factor signature 62 75 IPR000795 GO:0003924|GO:0005525
Lele29g0602 668 PRINTS GTP-binding elongation factor signature 138 149 IPR000795 GO:0003924|GO:0005525
Lele29g0602 668 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 95 110 IPR031157 -
Lele29g0602 668 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 58 256 IPR000795 GO:0003924|GO:0005525
Lele29g0602 668 TIGRFAM TypA_BipA: GTP-binding protein TypA/BipA 60 660 IPR006298 GO:0003924|GO:0005525
Lele29g0602 668 FunFam GTP-binding protein TypA 368 477 - -
Lele29g0602 668 Gene3D Translation factors 257 361 - -
Lele29g0602 668 FunFam GTP-binding protein TypA 59 256 - -
Lele29g0602 668 FunFam Elongation factor family protein 257 361 - -
Lele29g0602 668 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 265 IPR027417 -
Lele29g0602 668 Pfam Elongation factor Tu GTP binding domain 59 253 IPR000795 GO:0003924|GO:0005525
Lele29g0602 668 CDD BipA_TypA_II 263 360 - -
Lele29g0602 668 SUPERFAMILY EF-G C-terminal domain-like 365 448 IPR035647 -
Lele29g0602 668 FunFam GTP-binding protein TypA 545 631 - -
Lele29g0602 668 TIGRFAM small_GTP: small GTP-binding protein domain 61 200 IPR005225 GO:0005525
Lele29g0602 668 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 56 230 - -
Lele29g0602 668 Gene3D Elongation Factor G (Translational Gtpase), domain 3 368 652 - -
Lele29g0602 668 FunFam GTP-binding protein TypA 450 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0602 Lele-ChrLele29 3681804 3689861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0602 59 183 Eukaryotic Initiation Factors Gene Family AT3G22980 41.985 9.78e-25 108