Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0600 ATGGGATCCCAAAACAATGAGCTTGGAGCAGCAAGACTCCTTAAGGCTCAAACCCATATATGGAACCACACCTTTAGCTTCATAAACTCAATGACTCTCAAGTCTGCAATTGACTTGAACATCCCTGACATCATTCATAAGCATGGCAAGCCCATGCCTCTTCCTCTTCTCATCTCTTCCCTTCATGTCCACCCTTCTAAATCTCCTTGCATTCATCGCTTAATGCGATTCCTCACCTATTCTGGCTTCTTCTCTCTCCAGAAGCTTCCAGAAACTTCTGGCCCTTCTGAAGAAGGATATGTCCTAACCGATGCATCCACCCTTCTTCTTAGGGACCACCCCTTAAGTGCAACATCTTTCGTCCTCGCTGAGCTGGATCCCATCCTCAAAAAGCCCTGGTATGATATCCCCAATTGGTTCCAAAATGATGATATCACTCCGTTTCACACGACATATGGGAAAACATTTTGGGAGTATGCTAAGGTTGACCCTAATTTTAATCATTCTCTCAATGAAGCTATGGCCAGTGATGCGAGCTTGGTGATAAGTGTGGTGATAGACAAGTGTAAAGAGGTGTTTAAGGGAATAAAATCCTTGGTGGATGTTGGGGGTGGCACTGGGACTGTGGCTAAAGCCATTGCTAGAGCCTTTCCAGAATTAGAATGTACTGTGTTTGATCTCCCACACGTTGTTGATGGCCTTCAAGATAGTAGGAATCTCAGGTTCTTAGGAGGGAACATGTTCGAGGCCATTATTCCAACTTGTGATGCTATATTGTTGAAGTGGATCATGCATGATTGGAGCGACGAGGAGTGCCTGAAAATTCTGAAGAAATGCAAGGAGGGAATTGCAGGCAAAGGGAAAGCAGGAAAGGTGATTATAATAGACATGATTATGGAGGACGACAAGGGAGGCAATAACAACGACAAACTGACTGAAAATCAATTGTTGTTTGACATGCTGATGATGGTTTGTCTAACTGGAAAAGAGAGGAATGAGAAAGAATGGGCCAAGTTAATATGCTCTGCTGGTTTTAGTGGTTACAAGATTTATCCCATTCTAGGGTCACGATCTCTCATCGAGAGTAGTTGTTGTCTTCAAGATATGGAATTGTTTTGTGATGATGTTAAAATAGAGTGTGCAGTTAAGAAATGGATTCTACATGATTGGAATGATGAGGAATGTGTGAAGATATTGAAGAATGCAAGGAGTCAATTACAAGCAAATGGAAAGATGATTGGAAGGAATGAAAAAGAGTGGGCCAAGTTGATTTTTTCTGCTGGTTTTAGTGACTATAAGATTACTCCGGTTCTAGGTTTAAGATCTCTCATGGAGGTTTTCCCATGA 1347 0.4224 MGSQNNELGAARLLKAQTHIWNHTFSFINSMTLKSAIDLNIPDIIHKHGKPMPLPLLISSLHVHPSKSPCIHRLMRFLTYSGFFSLQKLPETSGPSEEGYVLTDASTLLLRDHPLSATSFVLAELDPILKKPWYDIPNWFQNDDITPFHTTYGKTFWEYAKVDPNFNHSLNEAMASDASLVISVVIDKCKEVFKGIKSLVDVGGGTGTVAKAIARAFPELECTVFDLPHVVDGLQDSRNLRFLGGNMFEAIIPTCDAILLKWIMHDWSDEECLKILKKCKEGIAGKGKAGKVIIIDMIMEDDKGGNNNDKLTENQLLFDMLMMVCLTGKERNEKEWAKLICSAGFSGYKIYPILGSRSLIESSCCLQDMELFCDDVKIECAVKKWILHDWNDEECVKILKNARSQLQANGKMIGRNEKEWAKLIFSAGFSDYKITPVLGLRSLMEVFP 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0600 448 SUPERFAMILY "Winged helix" DNA-binding domain 12 114 IPR036390 -
Lele29g0600 448 PANTHER O-METHYLTRANSFERASE 381 413 IPR016461 GO:0008168
Lele29g0600 448 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 364 IPR016461 GO:0008168
Lele29g0600 448 FunFam O-methyltransferase ZRP4 111 363 - -
Lele29g0600 448 Gene3D Vaccinia Virus protein VP39 111 363 IPR029063 -
Lele29g0600 448 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 361 IPR029063 -
Lele29g0600 448 Gene3D - 2 109 IPR036388 -
Lele29g0600 448 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Lele29g0600 448 Gene3D Vaccinia Virus protein VP39 377 448 IPR029063 -
Lele29g0600 448 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 380 446 IPR029063 -
Lele29g0600 448 FunFam Coniferyl alcohol 9-O-methyltransferase 3 109 - -
Lele29g0600 448 Pfam O-methyltransferase domain 383 413 IPR001077 GO:0008171
Lele29g0600 448 Pfam O-methyltransferase domain 133 346 IPR001077 GO:0008171
Lele29g0600 448 CDD AdoMet_MTases 199 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0600 Lele-ChrLele29 3670246 3673345 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0600 31 350 Monolignol Biosynthesis Gene Families AT5G54160 33.028 1.17e-49 171