Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0590 ATGAGTATTGTTGACAGAACTTGTCCTTCGTGTGGCCATCATGTCAAAGACCAGGGAGGAATACATGAGTTACCAGGATTACCAGCAGGAGTGAAGTTCGATCCTAGTGATCAGGAGCTTTTAGAACACTTGGAGGCGAAGGTGAGGTCTGATATTCAAAAGCTTCATCCTTTGATCGATGACTTCATTCCTACTCTTGAAGCCCAGAATGGAATCTGCTCTACTCATCCCCAGAAACTCCCAGGAGTTAGAAAAGATGGCTTGATCCGGCATTTCTTTCACAGGCCATCAAAAGCATACACAACGGGAACAAGAAAAAGGAGAAAGGTAAACTCAGAAGAAGCAGAAGGAAGTGAGACGAGGTGGCACAAAACAGGCAAGACGAGGCCTGTCTTCATTAATGGAAAGTTGAAAGGCTACAAGAAAATCCTCGTACTTTACGCCAACTATGGCAAACAGAGGAAGCCTGAGAAGACAAACTGGGTGATGCATCAGTACCACCTCGGATCCAACGAAGAGGAGAAGGAAGGCGAGTTGGTTGTGTCCAAGGTTTTCTATCAGACACAGCCTCGTCAGTGTGGTAATTCACTTCTCAAAACTCATCAACCCCTGCATCATCATCATCATCATCTTCTTCATGGAGCCGTCACCAACATCAAGAACAATAATGGCTTCGTTGAGTTCTATAACTCTGCTACCTTCATATCATTCGAACAAGCTGCCCAACAAAGATCTTCTCATTTCCCAGTTCATAATGATGAATCTCCTTTTATTGCTTGA 780 0.4423 MSIVDRTCPSCGHHVKDQGGIHELPGLPAGVKFDPSDQELLEHLEAKVRSDIQKLHPLIDDFIPTLEAQNGICSTHPQKLPGVRKDGLIRHFFHRPSKAYTTGTRKRRKVNSEEAEGSETRWHKTGKTRPVFINGKLKGYKKILVLYANYGKQRKPEKTNWVMHQYHLGSNEEEKEGELVVSKVFYQTQPRQCGNSLLKTHQPLHHHHHHLLHGAVTNIKNNNGFVEFYNSATFISFEQAAQQRSSHFPVHNDESPFIA 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0590 259 MobiDBLite consensus disorder prediction 106 122 - -
Lele29g0590 259 Gene3D NAC domain 36 191 IPR036093 GO:0003677|GO:0006355
Lele29g0590 259 MobiDBLite consensus disorder prediction 100 122 - -
Lele29g0590 259 FunFam NAC domain-containing protein 73 36 191 - -
Lele29g0590 259 Pfam No apical meristem (NAM) protein 28 168 IPR003441 GO:0003677|GO:0006355
Lele29g0590 259 ProSiteProfiles NAC domain profile. 27 187 IPR003441 GO:0003677|GO:0006355
Lele29g0590 259 SUPERFAMILY NAC domain 16 187 IPR036093 GO:0003677|GO:0006355
Lele29g0590 259 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 6 221 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0590 Lele-ChrLele29 3630259 3632228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0590 6 197 NAC Transcription Factor Family AT4G28500 77.320 9.28e-114 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele29g0590 NAM 2.1e-22 No_clan