Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0589 ATGATTACGAGACTTTGCCCTCTTCAAATCCTTCCCCACCTTGCGCCAGAAGCTGCACACGAAGAAGCGCCTACCAAATCTACCATGCTTCTCCTTCTCCTCCTTCTCTTTCTCTCTCCTCCATTCACTCTCTCTCTAACTCAAGACGGTCTCTTCCTTCACCAGGTCAAGCTTCAACTCTCCGATCCCGACAATGCTCTTTCTAACTGGAACCTCCGTGATGCCACCCCCTGCAACTGGTTCGGCGTCACCTGCGACACTCACTCCGGCGACGTCACTTCTCTCAACCTCCCCAACGCACAGCTCCAGGGACCCTTCCCCACCATCCTTTGCCGCCTCCCTTCCCTCACAGTCATCTCCTTCTACAACAACTTGATCAACTCTTCTCTTCCCGCCGATATCTCCGACTGTCGTCATCTTCAGTTTCTCAATCTCTCTCAGAACGCCCTCGTGGGTCCCATCCCGGACACGCTCTCGCAAATTTCAGGTCTACGGCATCTGGACCTCTCTTTCAATAACCTCTCCGGCGATATTCCGGCGTCTTTTGGTCAGTTCCAGCGACTCGAATCGCTTGAGCTCGTTATGAATCTGCTGAACGGGACAGTACCGAGTTATCTAGGTAATATTTCTTCCCTCAGAGTTCTTCGACTTGCTTATAACCCCTTTGCTCCGAGTCCTATACCGGTTGAATTTGGTAACCTGAAGAACATCGAGGAACTATGGCTCACTTATTGTAACTTAGTTGGTCCGATTCCGGCATCGTTGGGTCGTCTCACTCGGCTCTGGAACCTGGACTTTTCCATGAACAGACTCAATGGTTCTATTCCGGAATCAATTGTGGGGATTAGGAGCCTCGTTCAACTCGAGCTTTATCAGAACTCACTCTCCGGCAAGATACCTGTCGGAATGTCAAAGCTGACGAATCTGAGACGCTTCGATGCGTCGACGAACATGTTGACTGGGACGATTCCTGATGAGTTGTGCCGGTTGGAGCTCGAATCTCTTAATTTGGACGACAATCAACTTGTTGGGCCCTTACCAGAGAGCATAGCTCTTTCTCCGAATCTGCAGGAGCTCAAATTGTTTAACAATACGCTTACGGGGAAGTTGCCAAGTGCTCTTGGTAATAACTCGAAGCTCATGGTTCTTGACGTTTCGTACAATCAGTTTTATGATGAAATACCGGAGACTTTGTGTGAAGGAGGCGAGTTGGTAGCCCTGATTTTGATTTACAATTCATTTTCTGGGAAAATTCCTCAGAGTCTGGGAGAATGCACGAGCTTAAACAGGGTTCGAATGAGGAATAACAATCTCTCAGGCATAGTTCCTGATTCTCTCTGGGGTCTACCTCACATGTATTTGCTGGAGCTTCTTCATAATTCTCTATCTGGGCAAATTTCCAGCAAAATATCTGGTGCTCGTAATCTGTCACAGTTGTTAATTTCGAACAACCAATTTTCTGATTCGATACCTGATGAGATTGGGTCGTTGAATAATCTTGTTGAATTTGATGGCAGCCATAATACATTCTCTAGTCAGATTCCGGCCAGTATAGTCAAACTGAGCCAGTTGGGAAGGCTTGATCTCAGTGACAATAAACTTTCTGGAGCAATACCTGAAGAAATTGATGAATTGAATAAGCTCAGTGAGCTTAACTTGGCAAAAAATATGCTTGACGGGAATATTCCAAAGGAAATAGGGAGCTTGCCTTTGCTCAATTATCTTGATCTTTCAGGCAATCAGTTATGTTGTGAAATTCCACCCCAGTTGCAAAATTTGAAGCTCAATTCGCTGAATTTGTCATACAATCATCTTTCTGGGAACATTCCTTTTCTTTATGACAACGAGAATTACAGAAAGGGTTTCATAGGGAATCAGGGCCTCTGTGGTAATCTCTATGGACTTTGTCCACACTACGGTGAAAGTAAGAACCGGAGGTATCTGTGGCTTTTCCTGTCAATATTTGTACTTGCTGGTATTGCATTTGTTGTTGGGGTTGCATGGTTTTACTTCAAATACCGAAGCTTCAAGAAATTGAGAAATGGATTTAACGTGTCAAAGTGGAGATCATTTCACAGGTATGGATTCAGCGAGCTTGAGATTGTTAAACTGCTGAGTGAAGATAACGTGATTGGGAGCGGAGCATCTGGAAAGGTCTACAAAGTAGCGCTTAGCAATGGCGAGATAGTGGCAGTGAAGAAACTCTGGAGGGCAAATAACAAAGAAGATGGAAGTGTTGGTCCTGAGAAAGACGAATTCGAAGTTGAAGTTGAGACATTGGGAAAGATCAGACACATGAATATTGTAAGGCTATGGTGTTGCTGCAACACTGGGGATAGCAAGCTTCTAGTCTATGAATACATGCCAAATGGAAGCTTGGCTGACATACTTCACAGTAGCAAGAAAAGCTTGTTGGATTGGCCAACCAGATATAAGATTGCCATTGATGCTGCTGAGGGACTTTCTTATTTGCACCACGATTGTGTCCCACCAATTGCTCACAGGGACGTGAAGTCTAACAATATACTGCTAGATGGAGAGTTTGGGGCAAAAGTTGCAGATTTTGGGGTTGCCAAAATGTTAAGAGAAGGCGGCCAAGGCGGAGGATCCATGTCTGTCATTGCCGGATCTTATGGTTACATTGCACCAGAGTATGCCTATACCCTTCGGGTGAATGAGAAGAGTGATATTTATAGCTTTGGAGTGGTTATTCTTGAACTGGTGACAGGGAAACCCCCCATTGATTTACATTATGGAGAAGACGATTTGGTGAAATGGGTTTCCAAAACATTGAAAGAGAAAGGAATAGAGCAAGTGATTGATCCATGTCTTGATTCCAAATACGAAGAACAAATCAGCAAAGTACTCAGTATAGGGCTTCTTTGCACAAGCTGTCTTCCCATAACTCGTCCTTCCATACGTCGAGTGGTGAAAATGCTTCAGGAAGTTTCGGCAGATCCAAAATCCAGAAGTACTGTGAAGAGGGACGGAAAACTATCCCCTTATTATCCCGAAGAAACCGGCGATCATGAAAGCACAGTCTAA 3045 0.4499 MITRLCPLQILPHLAPEAAHEEAPTKSTMLLLLLLLFLSPPFTLSLTQDGLFLHQVKLQLSDPDNALSNWNLRDATPCNWFGVTCDTHSGDVTSLNLPNAQLQGPFPTILCRLPSLTVISFYNNLINSSLPADISDCRHLQFLNLSQNALVGPIPDTLSQISGLRHLDLSFNNLSGDIPASFGQFQRLESLELVMNLLNGTVPSYLGNISSLRVLRLAYNPFAPSPIPVEFGNLKNIEELWLTYCNLVGPIPASLGRLTRLWNLDFSMNRLNGSIPESIVGIRSLVQLELYQNSLSGKIPVGMSKLTNLRRFDASTNMLTGTIPDELCRLELESLNLDDNQLVGPLPESIALSPNLQELKLFNNTLTGKLPSALGNNSKLMVLDVSYNQFYDEIPETLCEGGELVALILIYNSFSGKIPQSLGECTSLNRVRMRNNNLSGIVPDSLWGLPHMYLLELLHNSLSGQISSKISGARNLSQLLISNNQFSDSIPDEIGSLNNLVEFDGSHNTFSSQIPASIVKLSQLGRLDLSDNKLSGAIPEEIDELNKLSELNLAKNMLDGNIPKEIGSLPLLNYLDLSGNQLCCEIPPQLQNLKLNSLNLSYNHLSGNIPFLYDNENYRKGFIGNQGLCGNLYGLCPHYGESKNRRYLWLFLSIFVLAGIAFVVGVAWFYFKYRSFKKLRNGFNVSKWRSFHRYGFSELEIVKLLSEDNVIGSGASGKVYKVALSNGEIVAVKKLWRANNKEDGSVGPEKDEFEVEVETLGKIRHMNIVRLWCCCNTGDSKLLVYEYMPNGSLADILHSSKKSLLDWPTRYKIAIDAAEGLSYLHHDCVPPIAHRDVKSNNILLDGEFGAKVADFGVAKMLREGGQGGGSMSVIAGSYGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGKPPIDLHYGEDDLVKWVSKTLKEKGIEQVIDPCLDSKYEEQISKVLSIGLLCTSCLPITRPSIRRVVKMLQEVSADPKSRSTVKRDGKLSPYYPEETGDHESTV 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0589 1014 Pfam Protein kinase domain 707 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g0589 1014 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 212 982 - -
Lele29g0589 1014 ProSitePatterns Serine/Threonine protein kinases active-site signature. 832 844 IPR008271 GO:0004672|GO:0006468
Lele29g0589 1014 MobiDBLite consensus disorder prediction 988 1014 - -
Lele29g0589 1014 Gene3D Ribonuclease Inhibitor 332 638 IPR032675 -
Lele29g0589 1014 FunFam Receptor-like protein kinase HSL1 689 787 - -
Lele29g0589 1014 Gene3D Ribonuclease Inhibitor 225 331 IPR032675 -
Lele29g0589 1014 ProSiteProfiles Protein kinase domain profile. 705 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g0589 1014 FunFam Leucine-rich receptor-like protein kinase family protein 227 325 - -
Lele29g0589 1014 Gene3D Transferase(Phosphotransferase) domain 1 788 1000 - -
Lele29g0589 1014 SUPERFAMILY Protein kinase-like (PK-like) 704 981 IPR011009 -
Lele29g0589 1014 Gene3D Phosphorylase Kinase; domain 1 686 787 - -
Lele29g0589 1014 SUPERFAMILY L domain-like 329 613 - -
Lele29g0589 1014 Pfam Leucine rich repeat N-terminal domain 48 86 IPR013210 -
Lele29g0589 1014 Gene3D Ribonuclease Inhibitor 45 224 IPR032675 -
Lele29g0589 1014 ProSitePatterns Protein kinases ATP-binding region signature. 711 734 IPR017441 GO:0005524
Lele29g0589 1014 SUPERFAMILY L domain-like 59 395 - -
Lele29g0589 1014 SMART LRR_typ_2 521 545 IPR003591 -
Lele29g0589 1014 SMART LRR_typ_2 378 401 IPR003591 -
Lele29g0589 1014 SMART LRR_typ_2 113 137 IPR003591 -
Lele29g0589 1014 SMART LRR_typ_2 569 592 IPR003591 -
Lele29g0589 1014 SMART LRR_typ_2 161 185 IPR003591 -
Lele29g0589 1014 SMART LRR_typ_2 306 330 IPR003591 -
Lele29g0589 1014 Pfam Leucine rich repeat 523 582 IPR001611 GO:0005515
Lele29g0589 1014 Pfam Leucine rich repeat 163 221 IPR001611 GO:0005515
Lele29g0589 1014 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 46 209 - -
Lele29g0589 1014 FunFam Receptor-like protein kinase HSL1 332 638 - -
Lele29g0589 1014 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 788 997 - -
Lele29g0589 1014 SMART serkin_6 705 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0589 Lele-ChrLele29 3623741 3626917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0589 41 1012 Receptor kinase-like Gene Family AT1G28440 60.305 0.0 1165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele29g0589 Pkinase 5.4e-46 CL0016