Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0586 ATGGGTGTTGATTATTACAAGATCTTGCAGGTTGACAAAAATGCCAAAGATGACGACTTGAAGAAGGCTTACAGGAAGCTTGCCATGAAATGGCATCCTGATAAGAACCCCAATAATAAGAAAGAAGCTGAAGCAAAATTCAAGCAGATATCTGAAGCCTATGACGTTCTCAGTGATCCTCAAAAGAGAGCCGTCTATGATCAATATGGCGAAGAGGGTCTGAAGGGTGGGGTTCCGCCTCCCGATGCCAGAGGAACTGGAGGAGCTTCTTTCTTTTCAACGGGAGAAGGACCGACGTCGTTTCGGTTCAATCCTAGAAATGCCGACGACATTTTTGCAGAATTTTTCGGGTTCTCGAGCCCGTTTGGAGGCGGTGGTGGCCATGGAGGGTTGAGGTCGTCGAGGTTCTCTAGTGGGATTTTTGGTGATGATATGTTTGGATCATTTGGAGACGGAAGGGGAGTCCATATGCATCCAGGTGCGCCTCGAAAAGCTCCTCCGATTGAGAACAGATTGCCCTGTAGTCTCGAAGACTTGTATCAAGGAACTACAAAGAAGATGAAGATCTCTAGAGAAATTGCTGATGCTAGTGGTAAAACCATGCCTGTAGAGGAGATCTTAACTATCAATATCAAACCTGGTTGGAAGAAGGGTACAAAGATAACCTTCCCAGAGAAAGGAAATGAGCAGCCAAATGTGACCCCTGCGGACCTTGTTTTTATCATCGATGAAAAGCCTCACAGTGTTTTCACTCGGGATGGAAATGATCTCGTTGTGACGCAAAAGATTTCTCTCGTGGAGGCCTTGACAGGTTATACGGTGCAGCTGACTACCTTGGATGGAAGAAACCTGACGATACCAATCAACAATGTGATTCAGCCAACTTATGAGGAAGTTGTTCCAAGAGAAGGCATGCCACTTCAAAAGGATCCCACAAAGAAGGGAAACTTGAGGATAAAGTTCAACATTAAGTTCCCAACTCGGCTGACATCAGAGCAGAAGGCAGGAATCAGAAAACTCTTGGGTGCCTAA 1032 0.4574 MGVDYYKILQVDKNAKDDDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGGVPPPDARGTGGASFFSTGEGPTSFRFNPRNADDIFAEFFGFSSPFGGGGGHGGLRSSRFSSGIFGDDMFGSFGDGRGVHMHPGAPRKAPPIENRLPCSLEDLYQGTTKKMKISREIADASGKTMPVEEILTINIKPGWKKGTKITFPEKGNEQPNVTPADLVFIIDEKPHSVFTRDGNDLVVTQKISLVEALTGYTVQLTTLDGRNLTIPINNVIQPTYEEVVPREGMPLQKDPTKKGNLRIKFNIKFPTRLTSEQKAGIRKLLGA 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0586 343 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 341 - -
Lele29g0586 343 MobiDBLite consensus disorder prediction 72 98 - -
Lele29g0586 343 SUPERFAMILY Chaperone J-domain 3 126 IPR036869 -
Lele29g0586 343 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Lele29g0586 343 PRINTS DnaJ domain signature 6 24 IPR001623 -
Lele29g0586 343 PRINTS DnaJ domain signature 24 39 IPR001623 -
Lele29g0586 343 PRINTS DnaJ domain signature 62 81 IPR001623 -
Lele29g0586 343 PRINTS DnaJ domain signature 42 62 IPR001623 -
Lele29g0586 343 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Lele29g0586 343 FunFam Dnaj homolog subfamily b member 164 245 - -
Lele29g0586 343 Gene3D DnaJ domain 3 128 IPR036869 -
Lele29g0586 343 FunFam DnaJ subfamily B member 13 247 327 - -
Lele29g0586 343 Pfam DnaJ C terminal domain 168 326 IPR002939 -
Lele29g0586 343 Gene3D - 247 327 - -
Lele29g0586 343 SUPERFAMILY HSP40/DnaJ peptide-binding domain 162 253 IPR008971 GO:0006457|GO:0051082
Lele29g0586 343 Pfam DnaJ domain 4 67 IPR001623 -
Lele29g0586 343 SUPERFAMILY HSP40/DnaJ peptide-binding domain 249 335 IPR008971 GO:0006457|GO:0051082
Lele29g0586 343 CDD DnaJ 4 59 IPR001623 -
Lele29g0586 343 FunFam DnaJ subfamily B member 13 3 126 - -
Lele29g0586 343 SMART dnaj_3 3 62 IPR001623 -
Lele29g0586 343 CDD DnaJ_C 166 329 - -
Lele29g0586 343 Gene3D - 167 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0586 Lele-ChrLele29 3600032 3601793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0586 5 69 C2H2 Transcription Factor Family AT1G74250 39.130 6.30e-10 58.5