Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0585 ATGCTCGCGGTGTCACCTTTGAGGGGAACCAAAGATGAAATTAAAAGCTGCCACGGAGAGATGGTGGGAGGTTTCTCATCAATCGTCGCTGGTGAAGATGACGACGGGTTTGGAGAATTTTGCGATGGGAATTTATTGGAAAGCATCAATTTTGACGATCTTTTTGTCGGCGTCAACGTCGACGACGCTGGAGATAAGTCGTTGGAGAACATGAACTACGAAATCCTGTCCGAGTTCTCCATGGAGTCATCGGAGAACATGAACTCGTCGACCTCGTTTTCAGTGGAAAATAATGATAATAGATCAGCTGATCAACACCAGACCAGTAATATTACAACTGGGAAGGAGGAGGAGGAAGAGGAAGAAGATTGTAACGATAAAGTTTCTTCAGCTTGGGATTCAAACTCTGGGTCAAGTCGAGCAGTGAAAAAAAGAGATGAATCTGCAACGACGACGAAGACGAAGAAGTTGAAGCCATGGAAGAAGGAAGAAGGTGAGCAAAAGGGAAGAAAATCATCAGGCCAATCCAACAATTCACAGGGGAAGAGAAAGATGAAGGTGGATTGGACCCCAGAATTACACAGACGATTCGTGCAAGCAGTGGAGCAGCTTGGAGTGGACAAAGCAGTGCCTTCCAAAATCTTAGAGATTATGGGAATTGCTTGTCTAACTCGCCACAACATCGCCAGCCACCTCCAGAAATATCGATCGCATAGGAAGCATTTGCTGGCGCGTGAAGCAGAAGCTGCGAGGTGGAAAAATAAGAGGATAGAGGTAAGGCCGTGGGCGGCGCCACCCAGCGTGGGTTTCCCTCAGATGCCTCCTCCTTTGACGTCGACGCCCACGATGCCCCATTATTTTAGACCCTTACATGTATGGGGCCACCCCACCATGGACCACTACTCCTTCATTCCCCGCTGGCCTAAACAACATCATCTTCCACATCAGCCGCCAGCGGCCTGGCCATACCCAACCGCTCCGCCACCTCCAGACCTTTCATTCTGGCACCCTCGCCACCAGCAGGCCGATCCGAAAGTACTAACCCCTGGAATAGGACCATATTGTTTCCCACCAACAGTACCTCTCACTACGTCGGAATTTGGATCTCCACCTGTCCCTGGCATCCCACCACCTCACGGCATGTTCACGGCGGATCCCGACACCGGATCTCCCACCGGACAACCTGCCCGACCTTGGCCCTACTTTGACTTCCACCCGTCGAAAGAAAGCATCGATGCAGCTCTAGGAGATGCTTTATCAAAACCATGGCTGCCACTTCCTCTGGGTCTTAAAGCCCCGGCGCTTGACAGCGTGTTGAGTGAATTACAGAGACAAGGAATCCCTAAGATTCCTCCCTCTCGTGCTTGA 1368 0.5066 MLAVSPLRGTKDEIKSCHGEMVGGFSSIVAGEDDDGFGEFCDGNLLESINFDDLFVGVNVDDAGDKSLENMNYEILSEFSMESSENMNSSTSFSVENNDNRSADQHQTSNITTGKEEEEEEEDCNDKVSSAWDSNSGSSRAVKKRDESATTTKTKKLKPWKKEEGEQKGRKSSGQSNNSQGKRKMKVDWTPELHRRFVQAVEQLGVDKAVPSKILEIMGIACLTRHNIASHLQKYRSHRKHLLAREAEAARWKNKRIEVRPWAAPPSVGFPQMPPPLTSTPTMPHYFRPLHVWGHPTMDHYSFIPRWPKQHHLPHQPPAAWPYPTAPPPPDLSFWHPRHQQADPKVLTPGIGPYCFPPTVPLTTSEFGSPPVPGIPPPHGMFTADPDTGSPTGQPARPWPYFDFHPSKESIDAALGDALSKPWLPLPLGLKAPALDSVLSELQRQGIPKIPPSRA 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0585 455 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 453 IPR044825 GO:0003700|GO:0045893
Lele29g0585 455 MobiDBLite consensus disorder prediction 83 186 - -
Lele29g0585 455 FunFam Two-component response regulator 180 243 - -
Lele29g0585 455 Pfam Myb-like DNA-binding domain 187 236 IPR001005 -
Lele29g0585 455 SUPERFAMILY Homeodomain-like 182 241 IPR009057 -
Lele29g0585 455 MobiDBLite consensus disorder prediction 83 110 - -
Lele29g0585 455 MobiDBLite consensus disorder prediction 139 170 - -
Lele29g0585 455 Gene3D - 181 242 - -
Lele29g0585 455 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 181 240 IPR017930 -
Lele29g0585 455 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 184 238 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0585 Lele-ChrLele29 3584387 3588925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0585 1 320 G2-like Transcription Factor Family AT5G44190 38.872 2.23e-46 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele29g0585 Myb_DNA-binding 3.9e-08 CL0123