Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0576 ATGCGTTCCTTCATATCTTGTAAATGTAATTCGTGCATATTTGGTGTCATCATAGATCCAACCCAGGATTTCCATGTAGGTACTATAGTGTGGTTACTTGAAAATGATGAAGTGCCTTGTGACCTTGTTCTGATTGTGTATATTTCACTTTGTGCATTTCAAGGACCTGATGATTTGGCATGTTATGCAGACGTCTGCACTGGATGTGGGCATGTGGAGTGGCTGTGTATACAGGCAGGCAATGAAACCAAGCTGGGAATGAGTAGGGGTATCCCAGAACCAAAGTTCACTGCAATGGATGCCATGATTGACAAGTTGACTGGTGCTATATTTGTATTCCAAATTGTGGTCATTATGGTTCTTGGTATAGCTGGTAATGTTTGGAAGGATACAGAGGCAAAGAAATGTGGGAAGATTTGTTGTTTGGGGGATCATTCGGGGCACATTTCAATGTTCCCTGCTCAGCTTGTTTCCTCTGAGCGTAGTTTGGTTTGTTGCACCTTGGGGTTGAAGTGGATTATATGCTTGAGTGAAGTTCATACTCTCAATGAGGAAAGGTGCATGTTGGTGGAGCCTCATGCTTGTTTTATTTTCTTATCTAATTTCTATACTCCTTTTTTCTTGAAGCAATGGTATGTCCTTTACCCAAATGAAGGCCCTTGGTTTGAACTATTGGTCATCCCTCTGCGATTTGAGCTTCTTTGTTCCGTCATGATACCCATTTCCATCAAGGTATCTCTAGATCTGGTGAAAAGCTTGTACGCAAAATTATTGATTGGGACCATCAGATGGTTGACTGAGAAACTGGTATTCTGTCCCATGAGACAAACGATAAGCGAGGACCTGGGTCAAGTTGAGTACATATTGACAGACAAGACAGGCACTCTGACTGAGAATAAGATGATTTTTAAAAGATGTTGTATCAGTGCCATTTTCTATGGAAATGAAAATGGAGATGCATTGAAAAGTCTGAATTTAGGAGCTTTGGGAGAGACAGCATGGGCAGCGTTGTATCTAGCTAGTAATGTTTTGGTTTCACATGTTAGGTTTTGTGCTTACAATGTTGAGCTTCTTAGTGGTATTGCTAATGGGTCCCCAGATGTTGTGCGATTTCTTACAATTATGGCAATATGTAATACTGTCATACTTACACGAAGCAAAATTGGAGATATTTTGTATAAGGCACAGTCTCAGGATGAGGATGCTCTTGTCAATGCCGCTTCTAGGTTGCAAATGGTTTTCTTCAATAAGAATGGAAATATTCTTGAAGTCAAGTTCAATTCTTCAATACTTAATTATGAAATTCTGGATACCCTAGAATTCACCTCTGATAGGAAACGAAGGTCAGTGGTGGTAAAAGATTGGCAAAATGGAAAGATCCTTCTCCTATCAAAAGGAGCAGATGAGGCAATTCTTCCATTTTCCCGTGCTGGGCAGCAAACCCGGAATTTCATTGAAGCTGTGGAGCAATATGCTCACTTAGGACTACGTAGGCTATGCTTGGCTTGGCGAGAGTTAAAGGAAGATGAACATCAACGGTGA 1542 0.4086 MRSFISCKCNSCIFGVIIDPTQDFHVGTIVWLLENDEVPCDLVLIVYISLCAFQGPDDLACYADVCTGCGHVEWLCIQAGNETKLGMSRGIPEPKFTAMDAMIDKLTGAIFVFQIVVIMVLGIAGNVWKDTEAKKCGKICCLGDHSGHISMFPAQLVSSERSLVCCTLGLKWIICLSEVHTLNEERCMLVEPHACFIFLSNFYTPFFLKQWYVLYPNEGPWFELLVIPLRFELLCSVMIPISIKVSLDLVKSLYAKLLIGTIRWLTEKLVFCPMRQTISEDLGQVEYILTDKTGTLTENKMIFKRCCISAIFYGNENGDALKSLNLGALGETAWAALYLASNVLVSHVRFCAYNVELLSGIANGSPDVVRFLTIMAICNTVILTRSKIGDILYKAQSQDEDALVNAASRLQMVFFNKNGNILEVKFNSSILNYEILDTLEFTSDRKRRSVVVKDWQNGKILLLSKGADEAILPFSRAGQQTRNFIEAVEQYAHLGLRRLCLAWRELKEDEHQR 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0576 513 Gene3D - 346 513 IPR023299 GO:0000166
Lele29g0576 513 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 75 512 - -
Lele29g0576 513 ProSitePatterns E1-E2 ATPases phosphorylation site. 291 297 IPR018303 -
Lele29g0576 513 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 296 507 IPR023299 GO:0000166
Lele29g0576 513 Pfam Cation transport ATPase (P-type) 377 472 - -
Lele29g0576 513 Gene3D - 301 322 IPR023299 GO:0000166
Lele29g0576 513 Gene3D - 286 300 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0576 Lele-ChrLele29 3508482 3513166 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0576 209 511 Primary Pumps ATPases AT5G44240 63.279 4.23e-122 382