Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0575 ATGATTGAACATGACTGGGAAGTTCTTGGTGTAACAGCTATAGAAGATCGTTTACAGGATGGAGTTCCTGAAACAATAAAAACACTTAGAAAGGCTGGAATAAATTTTTGGATGCTAACCGGAGACAAGCAGAATACTGCTATTCAAATTGCCTTGTCATGCAATTTTATTTCCCCAGAGCCAAAGGGACAGCTTCTATCAATTGATGAAAAAACCAAAGATGAGGTTTGTAGAAGTTTGGAGAGAGTTCTTCTTACAATGAGGATAACTCCCTCAGAAACTAAGAGTGAAGAAAGCTTAAATATTCTGACACACTGGTATGTGGCCTTTGTCGTTGATGGTTGGGCTCTTGAGATTGTGCTTAACCACTACCGGAAAGCTTTTACTGAGCTTGCCATACTGTCAAGGACTGCTAGATGTTGCCGTGTGACACCATCGCAAAAAGAACAGAGGGCTTGGGCTCCCTCTATGCCTAATATACTCTTAGACAAGGACGCTGCCTCTTTGATGAAGCACGTCATTCATGCATATGAAGGCTTTTGCTTCTTTGTTCCCCTTGGAATGATAGCTGCCATTCTTGTATTGTTCTTTTTAACTTCTAATGATACAGGCCAACGCTGTATACACTGCTTGTTGCAGCTTGTAGAGCTTTTAAAATCATGTGATTATAGAACACTGGCAATTGGTGATGGTGGAAATGATGTAAGGGTGATACAAACAGCTGACATAAGTGTCGGCATTAGTGGGAGAGAAGGGTTGCAAGCAGCAAGAGCAGCTGATTACGGTGTTGGAAGGGTCTCTGGAACCAGCCTTTTCAATTCTTTTAGCTTGATGGCTTATAATGTTTTCTACACTAGTGTTCCTGTACTAGTCAGCGTGCTTGACAAAGATCTTAGTGAAGAAACAATGATGCAGCATCCCCAAATTTTATTTTATTGCCAAGCTGGGAGGCTTCTAAACCCGAGTACATTTGCTGGATGGCTTGGGCGATCTCTGTTTCTTGTAAGTGCTGTTTATGAGCATATCGTTGGACATGAAATGGAGGATGTCTCGATGGTTGCGATCTCTGGTTGTACATGGTTGCAGGCTTTTGTGGTTGCAATGGAGACCAATTCCTTTACAATATTGCAACATCTTGCTATATGGGGGAATTTGGCTGCCTTTTATATCATCAACTTCATCTTCAGTGCCATTCCTTCGTCAGGGATTTATACGATTATGTTTCGTTGGATAACAATATTTGTAAGCTCCTCCGCATCTTTTGCCATTAAATCCCAATATACAATTGAGTTTAATCCCAAATAA 1305 0.4107 MIEHDWEVLGVTAIEDRLQDGVPETIKTLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDEKTKDEVCRSLERVLLTMRITPSETKSEESLNILTHWYVAFVVDGWALEIVLNHYRKAFTELAILSRTARCCRVTPSQKEQRAWAPSMPNILLDKDAASLMKHVIHAYEGFCFFVPLGMIAAILVLFFLTSNDTGQRCIHCLLQLVELLKSCDYRTLAIGDGGNDVRVIQTADISVGISGREGLQAARAADYGVGRVSGTSLFNSFSLMAYNVFYTSVPVLVSVLDKDLSEETMMQHPQILFYCQAGRLLNPSTFAGWLGRSLFLVSAVYEHIVGHEMEDVSMVAISGCTWLQAFVVAMETNSFTILQHLAIWGNLAAFYIINFIFSAIPSSGIYTIMFRWITIFVSSSASFAIKSQYTIEFNPK 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0575 434 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 4 68 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele29g0575 434 Pfam Phospholipid-translocating P-type ATPase C-terminal 266 414 IPR032630 -
Lele29g0575 434 Gene3D - 208 264 IPR023214 -
Lele29g0575 434 Gene3D - 6 169 IPR023214 -
Lele29g0575 434 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 266 423 - -
Lele29g0575 434 SUPERFAMILY HAD-like 2 266 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0575 Lele-ChrLele29 3504011 3508332 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0575 213 424 Primary Pumps ATPases AT5G44240 62.044 1.19e-98 317