Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0573 ATGACTGGTAGAGAAATCCTTCAGAAAATGAAGGTGAAAGCATTTGGAACATCAGGAGGTGACAGAGGGAAAGGGAAAAGCAAAATGTCAAAGAACATAACACATGGATTTCACTTGGTGAAGGGGAAATCAGCTCATGCTATGGAAGATTATGTAGTTTCAAAATTCAAGCAAGAGAAGGACAAGGAATTAGGTTTGTTTGCAATATTTGATGGTCATTTAGGCCATGATGTTGCAAGCTATTTGCAGAACAACCTTTTCGACAACATCCTAAAACAGGAAGACTTCTGGACTGATACAGAAAGTGCAGTGAAGAGAGCTTATCTTATAACTGACAACAAAATATTGGAACAATCATTTGAGTTGGGACGAGGAGGATCGACCGCCGTAACTGCAATACTGATAAATGGTCAGAAACTTGTAGTAGCAAACGTTGGAGACTCTCGAGCTGTTATTAGCAAGAATGGCAAGTCCAAGCAACTTTCCATTGATCACGAGCCAAGCAAGGAGAAAAGGATGATCGAGAGCCGTGGTGGTTTCGTCTCAAACATTCCAGGAGATGTGCCTCGTGTAGATGGAAAGCTGGCGGTAGCGAGGGCTTTTGGTGATAAGAGTTTAAAGATGCATCTTACTTCTGAACCTGATGTCGTTGTACAGAAGATTGAAGATGGCACAGAGTTCCTTATTTTGGCAAGTGATGGAATCTGGAAGGTGATGACAAACCAAGAAGCAGTGGATTGTATCAGAAAAGCAAAGGATGCTCAGGGTGCAGCGAAGCGCTTGATAGAAGAAGCTGTTGCAAGGAACAGTAAGGATGACATATCATGCATCATTGTCAAGTTCCAATAA 849 0.4193 MTGREILQKMKVKAFGTSGGDRGKGKSKMSKNITHGFHLVKGKSAHAMEDYVVSKFKQEKDKELGLFAIFDGHLGHDVASYLQNNLFDNILKQEDFWTDTESAVKRAYLITDNKILEQSFELGRGGSTAVTAILINGQKLVVANVGDSRAVISKNGKSKQLSIDHEPSKEKRMIESRGGFVSNIPGDVPRVDGKLAVARAFGDKSLKMHLTSEPDVVVQKIEDGTEFLILASDGIWKVMTNQEAVDCIRKAKDAQGAAKRLIEEAVARNSKDDISCIIVKFQ 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0573 282 Pfam Protein phosphatase 2C 46 274 IPR001932 -
Lele29g0573 282 FunFam Probable protein phosphatase 2C 39 24 282 - -
Lele29g0573 282 SUPERFAMILY PP2C-like 30 281 IPR036457 -
Lele29g0573 282 CDD PP2Cc 35 281 IPR001932 -
Lele29g0573 282 Gene3D - 19 282 IPR036457 -
Lele29g0573 282 SMART PP2C_4 24 279 IPR001932 -
Lele29g0573 282 PANTHER PROTEIN PHOSPHATASE 29 281 - -
Lele29g0573 282 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0573 Lele-ChrLele29 3487198 3488767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0573 23 282 PP2C-type Phosphatase Gene Family AT4G28400 75.385 4.64e-148 413