Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0567 ATGATTCTAACGTTGGTACTTTGCTTTTCATCATCGTCTCAAGCTTTGAAATTCAACGTTGGTGGCAAAGATGGCTGGGTTCTGAAGCCTTCTGAAGATTACAATCACTGGGCTGAAAGAAATAGGTTTCAAGTCAATGATACTCTCTATTTCAAGTACAAGAAAGGTTCTGATGCGGTTCTAGTTGTGAACAAGACGGATTACGATTCTTGCAACACCAAGAATCCCATGAAGAAGATGGACGACGGTGATTCTTACTTCGCCTTCGATAAATCGGGTCCTTTCTTCTTCATCAGTGGCGAATCTGGAAATTGCATAAAGGGTCAGAAGCTGATCGTCGTCGTCTTGGCTGTCCGGCACAAAACTCCGCGTTCACCTCCGGCTCCTTCTCCAGCTGGTGGGAGTCCACCGGCCATGTCGCCTCGGCCAAGTGAGGGACCAAATGCCGGTGACAATTCCCCGGCGCCGTCGCCGTCGCTTCCTTCGGGTTCTACGAGGTTTGGTGGTGCTGTTAGCGTGGTGGGGACGGTGTTGCTATGGGGTTGCTTCTTCGTTGGGCTTGTTTGA 567 0.4974 MILTLVLCFSSSSQALKFNVGGKDGWVLKPSEDYNHWAERNRFQVNDTLYFKYKKGSDAVLVVNKTDYDSCNTKNPMKKMDDGDSYFAFDKSGPFFFISGESGNCIKGQKLIVVVLAVRHKTPRSPPAPSPAGGSPPAMSPRPSEGPNAGDNSPAPSPSLPSGSTRFGGAVSVVGTVLLWGCFFVGLV 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0567 188 SUPERFAMILY Cupredoxins 15 116 IPR008972 -
Lele29g0567 188 MobiDBLite consensus disorder prediction 123 163 - -
Lele29g0567 188 MobiDBLite consensus disorder prediction 146 163 - -
Lele29g0567 188 ProSiteProfiles Phytocyanin domain profile. 16 117 IPR003245 GO:0009055
Lele29g0567 188 CDD OsENODL1_like 17 116 IPR041846 -
Lele29g0567 188 PANTHER BLUE COPPER PROTEIN 16 131 IPR039391 GO:0009055
Lele29g0567 188 Pfam Plastocyanin-like domain 26 109 IPR003245 GO:0009055
Lele29g0567 188 MobiDBLite consensus disorder prediction 124 143 - -
Lele29g0567 188 FunFam Early nodulin-like protein 1 15 120 - -
Lele29g0567 188 Gene3D - 14 119 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0567 Lele-ChrLele29 3436409 3437061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0567 13 183 Phytocyanin Superfamily AT4G28365 48.864 2.44e-52 164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0567 29 3436409 3437061 Lele31g0976 31 16955084 16955782 hybridization
Lele29g0567 29 3436409 3437061 Lele32g0547 32 3388819 3396166 hybridization