Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0564 ATGTCTTCCCCACTCATCTCTCTCTTTTTCATCCAAATCCTTGGCGTCCTTATCTCAGTTTCAGCTACTGAATTCATCTACAACGCCAACTTCACCTCTACTAACATCCTTCTCTCTGGCAATGCTTCCATTGATGCTTCCATTCTCACCCTCACCAACCGCACCTCCTTCTCCGTAGGTCGAGCTTTTTACCCTTTTAAAATATCCCCAAAGACTTCTAATTCTTCTTCTACTTTACCATTCTCAACCTCCTTCATTTTCTCTGTTGCTCCTTTTAAAGGCCTCCTTCCTGGACATGGGTTCGTCTTCATTCTCTCTCCTTTTACAGAAACAACGGGAGTAATCTCTGCCCAGTATTTGGGTCTCTTCAATTTCACCAATGATGGTAATCCCGACAACCATATTTTTGGTGTTGAATTTGATGTGTTCAAGAACCAAGAGTTTAACGATATCAATGATAATCATGTGGGTGTGGATATAAATTCGCTTACTTCTTTTAGTTCGCATGCTGCGGGTTCTTGGGTTGGGAAAGATGATGTGGAGTTTGAGGATTTGAAGCTTAATGATGGGGATAACTATCAAGTGTGGATTGATTTTCTGGATTCTACACTTAATATAACTATGGTCCGTGTAGGACGAAAGAGGCCTCGGAGACCGTTGATTAGTAAGCTTGTTAATCTTTCTTCGGTTTTTTTGGATGAAATGTATGTGGGATTTTGTGCGGCAACAGGGCAACTGGTGGAGAGTCATAAAATTTTGAGTTGGAGCTTTAGTAATTCCAATTTTTCAATCGGTGATGCTTTAGTGACTTCGAATTTGCCTTCATTCTTACTTCCTAAAAGACCAGTTCTAAGGTCAAAAGGTTTTATTATAGGAGTTAGTATGGGCGTCTTCTTTGTCATTGGCATTGTCAGTGTAATATTCGTACGTTTTCTTAGAAGGAAAACTAGCAAAAGAAATGAGGAAGAAGACACTGAAGATTGGGAATTAGAGTATTGGCCACACCAAATACGTTATGAAGATATTTATGCTTCCACTAAAGGATTTTCGGACCAAAACGTGATTGGGTTTGGAGGGAATGGAAAAGTCTATAAAGGGGTTTTAGAAGATGTAGAAGTTGCAGTAAAAAGAATCCCTTATAAGAGTGAGAGAGGCATGAGGGAATTTTTGTCTGAAATTTCAAGTTTAGGCAGATTGAAGCACAGGAATGTGGTGCCATTGATAGGTTGGTGTAAGAAAGAGAAAGCAAGTTTGATTTTGGTCTATGCTTATATGAGCAACGGAAGTTTAGACAAAAGGATATTTGATGTTGATGATGAGAACAAAATTTTGACATGGGAGGAGAGAATGAAGGTGTTAACGGACGTAGCTCATGGATTATTACCAACTGAACAAGATAAGCCAGGTTTGGTTGCTCAGGTTTGGAGGCTAATGGAGAGAGGAGAATTATATGATGCTCTTGATGAACATTTAAAGTGGACAAGAGATCACGACAGCGATGAAGCTGAACGGGTTCTTCATCTTGGTTTGTTGTGCACACTGCCTGATCCTAGTGCTAGGCCTACTATGAGACATGTTATGAAGGTGTTGGAAGAAGATAGGATGGATCTGAGCTTGATTGAAAAATTAAATTCTGCTGCCACCTCTGCAGTAAAAGCTGGAAGCTTCAATGACGGAATTTACCCGACTGTCGAGGAAATTTCCCGGCCCCATTTCTCTTTAACAACTCAGGAGGGTCGATGA 1743 0.4039 MSSPLISLFFIQILGVLISVSATEFIYNANFTSTNILLSGNASIDASILTLTNRTSFSVGRAFYPFKISPKTSNSSSTLPFSTSFIFSVAPFKGLLPGHGFVFILSPFTETTGVISAQYLGLFNFTNDGNPDNHIFGVEFDVFKNQEFNDINDNHVGVDINSLTSFSSHAAGSWVGKDDVEFEDLKLNDGDNYQVWIDFLDSTLNITMVRVGRKRPRRPLISKLVNLSSVFLDEMYVGFCAATGQLVESHKILSWSFSNSNFSIGDALVTSNLPSFLLPKRPVLRSKGFIIGVSMGVFFVIGIVSVIFVRFLRRKTSKRNEEEDTEDWELEYWPHQIRYEDIYASTKGFSDQNVIGFGGNGKVYKGVLEDVEVAVKRIPYKSERGMREFLSEISSLGRLKHRNVVPLIGWCKKEKASLILVYAYMSNGSLDKRIFDVDDENKILTWEERMKVLTDVAHGLLPTEQDKPGLVAQVWRLMERGELYDALDEHLKWTRDHDSDEAERVLHLGLLCTLPDPSARPTMRHVMKVLEEDRMDLSLIEKLNSAATSAVKAGSFNDGIYPTVEEISRPHFSLTTQEGR 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0564 580 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 262 IPR013320 -
Lele29g0564 580 CDD lectin_legume_LecRK_Arcelin_ConA 23 253 IPR001220 GO:0030246
Lele29g0564 580 Gene3D - 21 269 - -
Lele29g0564 580 SUPERFAMILY Protein kinase-like (PK-like) 339 539 IPR011009 -
Lele29g0564 580 FunFam L-type lectin-domain containing receptor kinase S.4 21 265 - -
Lele29g0564 580 PANTHER - 470 533 - -
Lele29g0564 580 Pfam Protein tyrosine and serine/threonine kinase 352 460 IPR001245 GO:0004672|GO:0006468
Lele29g0564 580 Pfam Legume lectin domain 23 261 IPR001220 GO:0030246
Lele29g0564 580 ProSitePatterns Protein kinases ATP-binding region signature. 355 376 IPR017441 GO:0005524
Lele29g0564 580 Gene3D Transferase(Phosphotransferase) domain 1 462 546 - -
Lele29g0564 580 Gene3D Transferase(Phosphotransferase) domain 1 331 461 - -
Lele29g0564 580 ProSiteProfiles Protein kinase domain profile. 349 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g0564 580 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 310 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0564 Lele-ChrLele29 3412604 3414610 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0564 20 461 Receptor kinase-like Gene Family AT4G04960 56.629 4.86e-164 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele29g0564 Lectin_legB 5.5e-61 CL0004