Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0541 ATGGGAGAATATGCTAATGGAGAGGAGGCACTGACATTACAAGGTCAAGTTCATATATGGAAGAGCATCTTCAGTTTCGTAGATTCCATGGCACTCAAATCCGCCGTGGAGCTCCATATTCCGGATATTATACACCGCCACGGCGGACCAATCTCCTTGTCCCAGATCACCGCCTCTCTCTCCGACGCTTCTTCTCCCGACCCCACCTCCCTCGACCGCATCATGAGGCTCCTCGTCCGCCGTAACATCTTCACCGCCCACCACCCATCAGACGGAGGAGACACCCTCTACGGCCTCACCCCCTCTTCCCGCTGGCTTATTCGTGACTCAGATTTGAACCTCGCTCCCGCGCTTCTCATGCAGAACCACCCCATCCTTCTGGCTCCGTGGCACTATCTGAGTAATTGCGTGAGAGAAGGTGGCCTGGCGTTCAACAAGGCTCATGGCCGGGAGATATGGGAGTTAGCATCGGAGAGCCCAGAGTTCAACAAGCTGTTCAATGACGGGATCGCGTGTACGGCGAGGCTGCTGGTGAGGGCGGTCGTATCGGCGTACAAGGAAGGGTTCGAGAGTATTGGATCGTTGGTGGACTTGGGAGGGAACATCGGAGGGACGGCGTCGGAGATAGTGAAAGCTTATCCGCACATCAAGTGCATCAACTTCGATCTTCCTCATGTGATCGCCACTGCACCTGAATACGGCGGAGTCACCCACGTCGGAGGAGACATGTTCCACTCCATCCCTCCTGCTGATGCGGTTTTCTTGAAGTGGATACTGCACGATTGGAGAGACGAAGACTGCATAAAGATACTAACGAATTGCAAGAAGGCGATAGCTGAAAAGAAAGGGAAGGTGATAATAGCAGAATTTGTGCTGAGACCAGATGGAACAGACTTGTTCGACGACATAAGCTTGGTCACCGATTTGCTGATGATTGCACATTCGTCAGGTGGAAAAGAGAGAACTGAATCGGAGTGGAAGAATCTCTTGAACCAAGCTGGCTTCCCTCGTTATCGAATCATCAACACTCCCTCTTTCTTATCCATCCTTGAGGCTTCCCCGTTCTGA 1068 0.5253 MGEYANGEEALTLQGQVHIWKSIFSFVDSMALKSAVELHIPDIIHRHGGPISLSQITASLSDASSPDPTSLDRIMRLLVRRNIFTAHHPSDGGDTLYGLTPSSRWLIRDSDLNLAPALLMQNHPILLAPWHYLSNCVREGGLAFNKAHGREIWELASESPEFNKLFNDGIACTARLLVRAVVSAYKEGFESIGSLVDLGGNIGGTASEIVKAYPHIKCINFDLPHVIATAPEYGGVTHVGGDMFHSIPPADAVFLKWILHDWRDEDCIKILTNCKKAIAEKKGKVIIAEFVLRPDGTDLFDDISLVTDLLMIAHSSGGKERTESEWKNLLNQAGFPRYRIINTPSFLSILEASPF 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0541 355 PANTHER O-METHYLTRANSFERASE 13 337 IPR016461 GO:0008168
Lele29g0541 355 SUPERFAMILY "Winged helix" DNA-binding domain 13 109 IPR036390 -
Lele29g0541 355 FunFam O-methyltransferase family protein 108 353 - -
Lele29g0541 355 Pfam O-methyltransferase domain 130 335 IPR001077 GO:0008171
Lele29g0541 355 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 352 IPR029063 -
Lele29g0541 355 Gene3D - 3 106 IPR036388 -
Lele29g0541 355 PIRSF O-mtase 1 354 IPR016461 GO:0008168
Lele29g0541 355 Pfam Dimerisation domain 30 79 IPR012967 GO:0046983
Lele29g0541 355 Gene3D Vaccinia Virus protein VP39 108 353 IPR029063 -
Lele29g0541 355 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 354 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0541 Lele-ChrLele29 3282858 3284600 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0541 30 341 Monolignol Biosynthesis Gene Families AT5G54160 42.138 7.24e-88 267