Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0540 ATGCAATATGGGAGAGGAGGAGGCTTTGATATTACAGGGGCAAGCGCTGATATATGGAAGTACATGTTCCACTTCGCAGATTCCATGGCCCTCAAATCAGCCGTGGAGCTCCGAATTCCCGACATTATACACCGCCACAGTGGTCCAATCACCTTGTCCCAGATCACCGCCTCTCTTTCCGACTCTCCCTCTCCCGACACCGCCTACCTCAGCAGCATCAGGAGGCTCCTTGTCCGCCGCAACATCTTCTCCGCGCATCGCCCATCCGATGGCGCCGGAGACACCCTCTACGTCCTCACCTACTCTTCCCAGTGGCTCCTGAGTGACTCCACCGTGAACCTAGCACCCATGCTTCTCATGGAAAACCCCTTAACCCTTCTGGTTCCGTGGCACTATCTTAGCCACTGTGTGAGAGAAGGAGGCGTGGCCTTCAAGAAGGCTCACTCCCGAGAGATTTGGGAGATGGCGTCAGAGAATCCAGAACTCAACAAGCTGTTCAATAATGGGATGGCGTGTACGGTGGCTGCTGCTAGCTTGGAGCCACGAAGATTGCATAAAGATACTGAAGGACAGCAAGAAAGGAATATCAGAAGAGAAAGGGAAGGTGATAATAGCATAGTTTGTGCTGAAGCCAGAGGGCAAAGGCTCATTCGGCGACATAGGTTTGCTCTTCGACTTGCTCATGATTGCTCATTCCTCCGGTGGAAAAGAGAGGACCGAATCTGA 726 0.5275 MQYGRGGGFDITGASADIWKYMFHFADSMALKSAVELRIPDIIHRHSGPITLSQITASLSDSPSPDTAYLSSIRRLLVRRNIFSAHRPSDGAGDTLYVLTYSSQWLLSDSTVNLAPMLLMENPLTLLVPWHYLSHCVREGGVAFKKAHSREIWEMASENPELNKLFNNGMACTVAAASLEPRRLHKDTEGQQERNIRREREGDNSIVCAEARGQRLIRRHRFALRLAHDCSFLRWKREDRI 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0540 241 Gene3D - 10 106 IPR036388 -
Lele29g0540 241 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 173 IPR029063 -
Lele29g0540 241 Gene3D Vaccinia Virus protein VP39 108 196 IPR029063 -
Lele29g0540 241 PANTHER O-METHYLTRANSFERASE 28 173 IPR016461 GO:0008168
Lele29g0540 241 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 19 241 IPR016461 GO:0008168
Lele29g0540 241 Pfam Dimerisation domain 29 70 IPR012967 GO:0046983
Lele29g0540 241 SUPERFAMILY "Winged helix" DNA-binding domain 12 110 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0540 Lele-ChrLele29 3275397 3276948 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0540 29 171 Monolignol Biosynthesis Gene Families AT5G54160 30.137 8.21e-16 73.9