Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0537 ATGAGTACAAAGGTAAGCAGGGCTTTTAAATTTCATGCGGAAGATCCCAGAGATCCACAAGGTGTTGTCATGACGCAGCTTGGTATTATTGCAAATATTAGCAGCAACATGGCTTCAATGGAACACACACAAACACTATCCGAGGCTTCTCTAAAGAGCCAAGCAATTATCTGGGACGCCCTCTTCGGGTTTGTGGACTCCATGGCCCTCAAATCTGCTGTGGAGCTCCGCATAGCAGACATCATACACTCTCATGGCGGACCAATCACCTTGTCCCAACTGGCAGCCTCCCTGGAATCTCCCTCCTCCCCAGATATCCCCTACCTCTTCCGCATCATGAGGTCACTCGTCCGCAACAAGATCTTTACCGTACATCATCCGTCCGATGGCGGTGAGGCTCTTTATGGGTTGACGGAAGCGTCCAAGTGGCTGCTCCATGGTTCTCCGTTCAGCCTGGCTCCAATGGTAATAATGGAGAACCATCCGTGGCAGCTTGCCCCATGGCATTTTCTGAGTGCGTGTGCCAGAGAAGGTGGCATCGCCTTCGAGAAGGCTCATGGGTGCGAGATGTGGGACTTCGCCTCCAAAAACGAAGCGTTTAATAAGATATTCAACGATGCATTGGCTTGCGCGGTTAAGTTCATCATGGAAGCATTACTGTACGAGTACAAAGATGGGTTCAACAACATAGAAACATTGGTGGACGTCGGTGGTGGCACTGGTGGCGCCGTGGCGGAGATCGTGACATCTTATCCACACGTCAAAGGAATCAACTTTGATCTGCCGCATGTCGTCGCTACGGCAAATCAGCACCCCGGAGTCACCCATGTTGGTGGCGACATGTTTCAGGCCATTCCTGCTGCTGATGCCATCCTCCTTAAGTGGGTTCTGCATGATTGGAGCGATGAGCACTGCATAAAGATTCTTCAAAACTGCAAGAATGCAGTGAGGGAGAAGAAGGGGAAGATCGTAATAGTGGAGATAGTGCTGGAGGAAGGAGAGGATAACTGCGTGTTTGGCAACACAAAGATGGCATTTGATCTGCTGATGATGGCGCACACAACGGGAGGAAAGGAGAGAAGTGAAGCTGAATGGGGCAAGCTATTGAAAGAAGCTGGTTTTGCGCGTTATAATATCATCAAAATCCCTACAATACCATCCATTATTGAGGCTTTCCCTTTTTGA 1185 0.4962 MSTKVSRAFKFHAEDPRDPQGVVMTQLGIIANISSNMASMEHTQTLSEASLKSQAIIWDALFGFVDSMALKSAVELRIADIIHSHGGPITLSQLAASLESPSSPDIPYLFRIMRSLVRNKIFTVHHPSDGGEALYGLTEASKWLLHGSPFSLAPMVIMENHPWQLAPWHFLSACAREGGIAFEKAHGCEMWDFASKNEAFNKIFNDALACAVKFIMEALLYEYKDGFNNIETLVDVGGGTGGAVAEIVTSYPHVKGINFDLPHVVATANQHPGVTHVGGDMFQAIPAADAILLKWVLHDWSDEHCIKILQNCKNAVREKKGKIVIVEIVLEEGEDNCVFGNTKMAFDLLMMAHTTGGKERSEAEWGKLLKEAGFARYNIIKIPTIPSIIEAFPF 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0537 394 FunFam O-methyltransferase family protein 146 392 - -
Lele29g0537 394 Pfam O-methyltransferase domain 168 375 IPR001077 GO:0008171
Lele29g0537 394 SUPERFAMILY "Winged helix" DNA-binding domain 47 148 IPR036390 -
Lele29g0537 394 PANTHER O-METHYLTRANSFERASE 51 376 IPR016461 GO:0008168
Lele29g0537 394 Gene3D - 37 144 IPR036388 -
Lele29g0537 394 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 58 393 IPR016461 GO:0008168
Lele29g0537 394 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 149 391 IPR029063 -
Lele29g0537 394 Gene3D Vaccinia Virus protein VP39 147 392 IPR029063 -
Lele29g0537 394 Pfam Dimerisation domain 68 117 IPR012967 GO:0046983
Lele29g0537 394 PIRSF O-mtase 33 394 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0537 Lele-ChrLele29 3262378 3263803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0537 68 380 Monolignol Biosynthesis Gene Families AT5G54160 38.994 2.25e-79 247