Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0534 ATGGGGTGTTGTGTATCCACAAGCAGTCGAAGTACGTGTAGCAGTAGGAGCAATGGTGACACGATCTCTCCATCTTGTTTGGAAGTAGGTTTCTGTGGGCAAAAGAGAACAAGGAGAACATTCTCTGATCATGTCATTGCTCTGCAGAATCTGCCGTCCTTACCTAATCGAATTTTCGCCAATGGAAAGAGCCGGACTTCTTGCATATTCACACAGCAAGGCAAAAAGGGTATCAATCAGGATGCCATGATTGTATGGGAAGATTTTGTCTCCGAAGATGCGATCTTTTGTGGCGTCTTTGATGGCCATGGTCCATATGGTCATGTTGTTGCACGCAATGTGAGGGATACCTTGCCGGTAAAACTACTTTCATTTTTGCACTCTTGTGAATCAAAGAGAAATGGTTCAGGCTCAGGCAAAGCTTGTTTCAAGGGGAATACTGATGATGGAGTCTACGAGAAGGATTGTTCCGCTGAGGATGTAGTGAATTCTGTCTGGAGAGAAGCTTTCATGAAGGCTTATAAGGCAATGGACAAAGAACTTAGGTCCCATCCAAATTTGGACTGCTTCTGTAGTGGGAGCACAGCTGTCACTATAGTGAAGCAGGGTTCAAATCTGTTCATGGGCAACATTGGGGATTCGCGAGCAATCATGGGATCCAAAGACAACAATGATTCCATGGTGGCCATTCAGTTAACTGTTGATTTGAAGCCTGATTTGCCAAGGGAAGCGGAAAGAATTAAACGGTGCAAAGGGAGAGTATTTGCACTGCAGGATGAGCCCGAGGTTCCCAGAGTGTGGTTGCCTTTTGATGATGCACCCGGATTAGCGATGGCTCGAGCATTTGGCGATTTCTGCTTGAAGGAGTATGGCGTGATTTCCATACCTGAGTTTTCTCACAGACTGCTTACAGACAGAGATCAGTTCATCGTTCTTGCCTCCGATGGGGTGTGGGATGTGTTAAGCAATGAAGAGGTAGTTGAGACAGTAGCTTCGGCACCGACTCGTTCATCGGCTGCTAGGATTCTGGTGGATTCTGCGGCTCGGGAGTGGAAGCTTAAGTATCCAACGTCAAAGATGGATGACTGCGCTGTTGTGTGCATGTTTTTGGATGGGAAGATGGACTCAGAATCTGATTATGACGATCCAGGCTTTTCTTCAGCAACCATCCAGAGCAACCATTCTGGCAATCCAGTCGAATCAGACGACGGCCAGAAGTCCGAGCCATCTCTGCATCGGAACTTCACCGTAAGATCTGCTGATGAAACTGAGACTTACGGAGGACTGCCGGTGGACGTCGTTGTCGAAGATGGAACAACGTCATCAGTGGAAGATCAAAACTGGTCAGGTTTGGAAGGTGTGACCCGTGTAAATTCACTGGTCCAGCTTCCTCGATTTTCTGAGGAAAGGCCGAACACTTGA 1422 0.4726 MGCCVSTSSRSTCSSRSNGDTISPSCLEVGFCGQKRTRRTFSDHVIALQNLPSLPNRIFANGKSRTSCIFTQQGKKGINQDAMIVWEDFVSEDAIFCGVFDGHGPYGHVVARNVRDTLPVKLLSFLHSCESKRNGSGSGKACFKGNTDDGVYEKDCSAEDVVNSVWREAFMKAYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGNIGDSRAIMGSKDNNDSMVAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVETVASAPTRSSAARILVDSAAREWKLKYPTSKMDDCAVVCMFLDGKMDSESDYDDPGFSSATIQSNHSGNPVESDDGQKSEPSLHRNFTVRSADETETYGGLPVDVVVEDGTTSSVEDQNWSGLEGVTRVNSLVQLPRFSEERPNT 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0534 473 PANTHER PROTEIN PHOSPHATASE 66 368 - -
Lele29g0534 473 SUPERFAMILY PP2C-like 59 372 IPR036457 -
Lele29g0534 473 MobiDBLite consensus disorder prediction 380 410 - -
Lele29g0534 473 SMART PP2C_4 50 368 IPR001932 -
Lele29g0534 473 Gene3D - 58 378 IPR036457 -
Lele29g0534 473 CDD PP2Cc 72 370 IPR001932 -
Lele29g0534 473 Pfam Protein phosphatase 2C 141 346 IPR001932 -
Lele29g0534 473 MobiDBLite consensus disorder prediction 1 20 - -
Lele29g0534 473 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
Lele29g0534 473 MobiDBLite consensus disorder prediction 382 404 - -
Lele29g0534 473 FunFam probable protein phosphatase 2C 52 57 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0534 Lele-ChrLele29 3242253 3244574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0534 1 473 PP2C-type Phosphatase Gene Family AT1G03590 67.925 0.0 625
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0534 29 3242253 3244574 Lele31g1010 31 17153704 17156027 hybridization
Lele29g0534 29 3242253 3244574 Lele32g0513 32 3210788 3213081 hybridization