Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0531 ATGCCTCAACGCCAGCCATCATCGTTGATGGAACCGGTACTTCTCACTTACAGCAATGGCAGCTCCGGCCATGACTCTGATATCTTGAGCTGGTTTGAAGATGTGACCAAAAACGCTGGTTCTGTTCAGACTCAGATGTTATCCAAGATTCTGAAGCAGAACTTTGAGGTTGAGTACCTCAAGAAATGGCTTGGAGAGTATAATATTCAAGACATGGATGACTCTGCATTGGAATCGCTTTTCACTTCATTGGTTCCTCTGGCTTCACATGCAGATTTTGAGCCCTTTATCCAAAGAATTGCAGATGGAGACACGGGCCCTTTACTCACTCAACAATCCATAACCACCCTTTCTTTGAGTTCTGGAACCACAGAAGGGAGGCAAAAGTTCGTACCTTTCACCCACCATAGCGCACAGACTACCCTCCAAATTTTCACTTTAGCAGCAGCTTATAGATCAACAGTTTATCCCACAAGAGAAGGAGGAAGGATTCTGGAGTTCATATACAGCAGCAAGCAGTTCAAAACAAAAGGAGGGTTAACAGCAGGAACAGCCACAACACACTACTACGCAAGCCAAGAGTTCAAGATCAAGCAAGAGAAAACGAAGTTGTTCACTAGCAGCCCATATGAAGTAATCTCAGGAGGAGATTACAAACAAGTCACTTACTGTCACCTTCTTCTTGGACTTTTTTACTCTGAACAAGTTGAGCTCATAACCTCAGCTTTTGTCTACAGCATAGTTCAAGCCTTTCGCAACTTCGAAGAGCTTTGGAGAGAAATATGTTGTGACATAAGAAATGGTACTCTGAGTTCCGGAATCAAAATACCCAGAATGAGAAACTCTGTTTTGGAGATTATCTCCGATCCAAACCCATCTTTGGCCTCAAAGATAGAAGCTAAATGCCAGGAACTTGAAAAGTTGAATTGGTTTGGTTTAATTCCTAAGCTGTGGCCAAATGCAAAGTATGTGTATTCTATAATGACAGGATCTATGGAACCTTATTTGAAGAAACTAAGGCATTATGCGAATGGATTGCCATTAGTGAGTGCTGATTATGGATCTACAGAGAGCTGGATTGGTGTTAATGTGGATCCTGGCTTGTCTCCTGAGAACGTTACATTCGCTGTAGTTCCTACTTTCTCGTACTTTGAATTCATCCCACTTCACAGATCCCAGAAATCACAAGAATGCAATTCGGTTACTGATGATTTCGTCGAAGCCAAGCCAATCCCTTTGTCCCAGGTTCAAGTTGGACAGAAGTATGAAATAGTCCTCACAACTTCCACCGGGCTATACAGGTGCAGATTAGGAGACGTGGTGGAAGTAGCCGGATTTCACAACAGGACTCCAAAGTTGAACTTCATATGCAGAAGGAAGCTAATTCTAACAGTGAACATAGACAAGAACACAGAGAAGGACCTGCAACTAGTGGTAGAGAGGGGATCACAGCTTCTGAGCACGGCTCATCTAAAGAATAATAACAGAGCCGACCTAGTGGACTTCACGAGCTATGCTGACGTGTCAAACCAACCAGGACACTACGTTGTATACTGGGAAGTCAAAGGTGAGGTTGAGGACGAGGTTCTTGAGCAATGTTGTAGGGAGATGGACGAAGCTTTTGCAGACCACGGTTATGTTGTTTCCAGGAAGACCAATTCCATTGGACCTCTTGAGCTTCGCTTGGTGGAGAGAGGAACATTCAAGAAGATCCTAGATTACTTCGTTGCTAATGGAGCTGCTTTGAGCCAGTTCAAGACTCCTAGGTGCACTAATAACCAGGTGCTTCTCAAGATTCTTAACACTTGCACCATCAAAAGTGTTCGCAGCTCTGCTTACGCTGCTTAA 1848 0.4378 MPQRQPSSLMEPVLLTYSNGSSGHDSDILSWFEDVTKNAGSVQTQMLSKILKQNFEVEYLKKWLGEYNIQDMDDSALESLFTSLVPLASHADFEPFIQRIADGDTGPLLTQQSITTLSLSSGTTEGRQKFVPFTHHSAQTTLQIFTLAAAYRSTVYPTREGGRILEFIYSSKQFKTKGGLTAGTATTHYYASQEFKIKQEKTKLFTSSPYEVISGGDYKQVTYCHLLLGLFYSEQVELITSAFVYSIVQAFRNFEELWREICCDIRNGTLSSGIKIPRMRNSVLEIISDPNPSLASKIEAKCQELEKLNWFGLIPKLWPNAKYVYSIMTGSMEPYLKKLRHYANGLPLVSADYGSTESWIGVNVDPGLSPENVTFAVVPTFSYFEFIPLHRSQKSQECNSVTDDFVEAKPIPLSQVQVGQKYEIVLTTSTGLYRCRLGDVVEVAGFHNRTPKLNFICRRKLILTVNIDKNTEKDLQLVVERGSQLLSTAHLKNNNRADLVDFTSYADVSNQPGHYVVYWEVKGEVEDEVLEQCCREMDEAFADHGYVVSRKTNSIGPLELRLVERGTFKKILDYFVANGAALSQFKTPRCTNNQVLLKILNTCTIKSVRSSAYAA 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0531 615 Pfam GH3 auxin-responsive promoter 31 594 IPR004993 -
Lele29g0531 615 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 26 613 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0531 Lele-ChrLele29 3228743 3232293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0531 22 600 EF-hand Containing Proteins AT1G23160 36.088 6.60e-125 379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g0879 11 8821214 8822918 Lele29g0531 29 3228743 3232293 CCT
Lele12g0464 12 12568322 12569989 Lele29g0531 29 3228743 3232293 CCT
Lele09g0873 09 6994984 6995502 Lele29g0531 29 3228743 3232293 CCT
Lele10g0801 10 6410236 6410760 Lele29g0531 29 3228743 3232293 CCT
Lele29g0531 29 3228743 3232293 Lele31g1015 31 17177385 17180375 hybridization
Lele29g0531 29 3228743 3232293 Lele32g0508 32 3190214 3192772 hybridization