Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0529 ATGGGTGGGATGAGATCTGATTTTGAGTATAAAGGAGCAAAGATCTATGGGCAAGTTTTATTGGGATTCATGTTGATCTGTACGATTCAGTTTTCACTAGCGGACACGAATCCTGCTGACGTTTCTGCAATAAATAGTTTACATGCTGCGCTGGGCTTCCCTGTTCTCCCTGGGTGGGTTCCAAGTGGGGGAGATCCGTGTGGACAAGCATGGCAAGGCATTCAGTGTAATGGTTCAGATATACAGTCAATAGTTCTGGTCGGTGCAAATTTGGGAGGTGAACTGGGTGATAGCTTGGGAACGTTTGCTTCTATAAAGACAATAGATCTAAGCAACAACCACGTTGGCGGAAGTATTCCAACCAGCTTGCCAGTCTCCTTGCAAAGTTTTTTTCTTTCAGATAACCAGTTTACTGGAAGTATTCCAACCTCTTTATCTACATTGACTGAGTTGACGGTCATATCTTTTAATGACAATCGGTTGTCAGGAAAAATTCCGGATATATTTCAGTCACTCACAAAATTGGTTAATTTAGATTTCGCGAATAACAATTTTAGTGGGGAACTACCTCCATCTGCAGAGAATTTGTCAGCTTTAGTCTCCCTACATTTGCAGAACAATCAACTATCTGGGACCCTTGATGTTTTACAAGACCTTTCACTGACTGATTTGAATATAGAGAACAACCAATTTAATGGACCAATTCCTCAAAAGCTTCTAAGCATCCCAAACTTCAGACAAGATGGAAACCCATTTAATGTTGTTAATGGTACTACAGTTTCAGCCCCTCCATCTCGTTCTCCAGTAACAACATCACCAGGAACTGTGGTTTCTGGGGCCCCAACTACTGGACATGTACCTACTACTAAACCGGCTGAAGGACCAACTACATCAAAGGAATCAAATTCTGGAAAAGCAAGAAAGAACACCAAAAGGGTGGTTTGGATATCTATTGCAAGTGTATTAGGATTTATTATATTGGTGTTGGCACTCCTTCTCTTTGCTCCAAGATGTACCAGAAGGGAAAGGGATGGCAGAAGAATTTCTAAGCAACACCAAATAGGAGCATATGGAGATGACAGACACGATCATAGGAATCATGGGACTTCAGTCCAACCACCCAGTCAAACTGAGAAAGTACCAAACGGGGCTGTTCTGAGAACAAAAGAAGATCATCAAGCAGAGATCAGGAGAGTAGAAGCTATTCCCAGGTCACAATATGAGCAAGGGCAAGATGTGCGAAGAATGGGAACATTACCCAAGCGGGATGATCATGAGATAGATATGAGTGCACTAGATGTGTACTCACTGCCTCCTCCCCCTCCCCCTCCACCACCACCCCCACCACCTGATGAGAAGGTGACTGCTGAGCCAATTCCTTTCCAACGAGGGGCTACGGTCAATCCTTCTGTGAAAAAGCCAGTTCCTCCCACTTTTGCAAAATCTTTCACTATTGCATACCTTCAACAGTATACGAACAGCTTTTCTCCAGAAAACCTTATAGGAGGAGGCATGCTGGGGAACGTGTATAGGGCAGAGCTACCTGATGGGAAGCTACTTGCTGTGAAGAAACTAGACAAAAGAGCTTCTGAACATCAAAAGGATCACGAATTTCTTGAACTAGTAAACAGTATTGACAGAATCAGGCACGCAAATATTGTTGAGCTTATCGGTTACTGTGCTGAGCATGGCCAAAGGCTTCTGATCTATGAATACTGCAGTAATGGGTCACTGCAGGATGCACTGCATTCAGATGATGAGTTCAAAACCAGATTGTCATGGAATTCTCGCATTCGGATAGCCCTTGGGGCAGCCAGGGCCTTAGAGTATTTGCATGAGATCTGCCAACCACCTGTTGTACACAGAAATTTCAAGTCTGCCAATATGCTACTTGATGATGATCTATCTGTGCGTGTTTCGGATTGTGGTTTGGCTCCCTTGATAGCTTCAGGTTCCGTAAGTCAGCTCTCAGGGCAACTGCTAACAGCTTATGGCTATGGAGCTCCAGAATTTGAGTCTGGAATTTACACGCACCAGAGTGATGTGTATAGTTTCGGAGTGGTTATGTTAGAACTATTGACAGGCCGCCAATCCTATGACAGGACACGCTCTCGGGGAGAGCAATCTCTAGTTAGATGGGCAATTCCTCAACTACATGATATTGATGCCTTATCAAATATGGTAGATCCTTCTCTCAATGGAGACTACCCAGCCAAATCATTGTCAAACTTTGCAGACATTATTTCTCAGTGTGTTCAGTCGGAGCCAGAATTTAGGCCACCTATGTCAGAGGTTGTTCAATATCTACTAGATATGATAAGGAAGGAATCTCACAGGAGTGGATCAAATGAAGACTGA 2358 0.4364 MGGMRSDFEYKGAKIYGQVLLGFMLICTIQFSLADTNPADVSAINSLHAALGFPVLPGWVPSGGDPCGQAWQGIQCNGSDIQSIVLVGANLGGELGDSLGTFASIKTIDLSNNHVGGSIPTSLPVSLQSFFLSDNQFTGSIPTSLSTLTELTVISFNDNRLSGKIPDIFQSLTKLVNLDFANNNFSGELPPSAENLSALVSLHLQNNQLSGTLDVLQDLSLTDLNIENNQFNGPIPQKLLSIPNFRQDGNPFNVVNGTTVSAPPSRSPVTTSPGTVVSGAPTTGHVPTTKPAEGPTTSKESNSGKARKNTKRVVWISIASVLGFIILVLALLLFAPRCTRRERDGRRISKQHQIGAYGDDRHDHRNHGTSVQPPSQTEKVPNGAVLRTKEDHQAEIRRVEAIPRSQYEQGQDVRRMGTLPKRDDHEIDMSALDVYSLPPPPPPPPPPPPPDEKVTAEPIPFQRGATVNPSVKKPVPPTFAKSFTIAYLQQYTNSFSPENLIGGGMLGNVYRAELPDGKLLAVKKLDKRASEHQKDHEFLELVNSIDRIRHANIVELIGYCAEHGQRLLIYEYCSNGSLQDALHSDDEFKTRLSWNSRIRIALGAARALEYLHEICQPPVVHRNFKSANMLLDDDLSVRVSDCGLAPLIASGSVSQLSGQLLTAYGYGAPEFESGIYTHQSDVYSFGVVMLELLTGRQSYDRTRSRGEQSLVRWAIPQLHDIDALSNMVDPSLNGDYPAKSLSNFADIISQCVQSEPEFRPPMSEVVQYLLDMIRKESHRSGSNED 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0529 785 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 573 783 - -
Lele29g0529 785 MobiDBLite consensus disorder prediction 259 309 - -
Lele29g0529 785 MobiDBLite consensus disorder prediction 343 381 - -
Lele29g0529 785 MobiDBLite consensus disorder prediction 435 455 - -
Lele29g0529 785 MobiDBLite consensus disorder prediction 259 303 - -
Lele29g0529 785 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 37 264 - -
Lele29g0529 785 MobiDBLite consensus disorder prediction 434 456 - -
Lele29g0529 785 SUPERFAMILY Formin homology 2 domain (FH2 domain) 439 448 - -
Lele29g0529 785 Gene3D Transferase(Phosphotransferase) domain 1 573 785 - -
Lele29g0529 785 SUPERFAMILY L domain-like 37 244 - -
Lele29g0529 785 Pfam Protein tyrosine and serine/threonine kinase 499 769 IPR001245 GO:0004672|GO:0006468
Lele29g0529 785 Gene3D Ribonuclease Inhibitor 39 259 IPR032675 -
Lele29g0529 785 ProSiteProfiles Protein kinase domain profile. 495 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g0529 785 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 76 769 - -
Lele29g0529 785 MobiDBLite consensus disorder prediction 343 368 - -
Lele29g0529 785 Gene3D Phosphorylase Kinase; domain 1 465 572 - -
Lele29g0529 785 SUPERFAMILY Protein kinase-like (PK-like) 472 769 IPR011009 -
Lele29g0529 785 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 462 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0529 Lele-ChrLele29 3201384 3207569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0529 31 781 Strubbelig Receptor Gene Family AT4G03390 63.863 0.0 885
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lele29g0529 PK_Tyr_Ser-Thr 2.7e-43 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0529 29 3201384 3207569 Lele31g1017 31 17192777 17201688 hybridization
Lele29g0529 29 3201384 3207569 Lele32g0506 32 3164003 3171520 hybridization