Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0518 ATGACGATAGGTTCCCTCTTCAGCAAAGCTGCCAGGACTTTCCATAGCTATCCTACTTCTAAGCTTCTCCTCATCTGCACTCTCAGTGGTGGAGGTGTGGTAGCGTACTCAGAATCACAATCTGATTCTGGACGTCCAAGAATTGAACCTAATGAGCGTGGGAAAAAGAGAGTAGTGGTTCTTGGAACAGGATGGGCTGGTACCAGTTTCCTTAAGGATCTGGATGCTTCGATATATGATGTTCAGGTTGTTTCGCCTCGCAACTACTTCGCATTTACTCCCTTATTACCCAGTGTGACTTGTGGGACAGTTGAAGCAAGGAGCATTGTGGAGCCAGTGAGAAACATCATAAAAAAGAGAAAAGGAGAAATTAAATTTTGGGAGGCAGAGTGTCTCAAGATTGATGCTGCAAACAAAAAAGTTTTTTGTCGATCCAATATTGATGCCAACTTAGTGGGAAGTGGCGAATTTTCTCTGGAATATGACTTTTTGGTTGTAGCAACAGGTGCGCAAGTGAATACTTTTAACACTCCAGGTGTCAAGGAGAACTGTCATTTTTTAAAGGAGGTCGAGGATGCTCAGAGGATCAGAACTTCTGTGATAGATTGCTTTGAGAAGGCCATTCTTCCTAGTTTAACTGAAGAAGAGCGACAAATAAATCTTCATTTTGTAATTGTTGGGGGTGGTCCAACTGGTGTGGAATTTGCTGCTGAGCTTCATGATTATGTCCATGATGATCTATCTAAATTATACCCACTAGCTAAAGATTTGGTGAAAATAACAATGATCCAATCGGGAGATCACATCTTGAACACGTTTGATGAAAGAATCAGTACATTTGCTGAGCAGAAATTCGGCAGAGACGGTATAGAAGTTCAAACAGGATGCCGAGTTACCAGTGTGACTGATAAGGAAATTAAAGTGAAGATAAAATCAACAGGAGAGGTTTTCTCAATACCTCATGGATTGGTAGTCTGGTCCACTGGCATTGGGACTCTTCCAGTTGTGAGGGATTTCATGGAACAAATTAATCAGGCTAATAGAAAGGTCCTGCAGACTGATGAATGGTTGCGGGTGATAGGATGTGAAGCCGTGTACGCTATTGGGGACTGTGCTTCAATACATCAACGTAAAATCATGGATGACATTTCAACCATATTCAAAGCTGCGGACAAGGACAACTCTGGTACCTTAACCATTAAAGAATTCAAGGATGTAATGGATGACATCATCTTGAGATATCCCCAAGTGGAACTATATCTGAAGAGCAAACATATGCTTGATGTGGCTGATCTGTGGAAAGATCCTCAGGGGAAAGAGAGAGAGGAAGTAGACATAGAAGGGTTTAAGTCAGCCCTTTGTCAAGTGGATTCACAGATGAAGAGTCTGCCAGCAACTGCACAGGTTGCTGCCCAACAAGGTGCATATTTAGCTAGCTGCTTTAATCGCCTGGATCACTGCACTGATAATCCTGAAGGTCCAATGAGATTTAGAGAATCTGGACGCCATAAGTTTCGCCCCTTCAGGTACAAGCATTTAGGTCAATTTGCTCCCCTTGGTGGAGAGCAGGCAGCTGCAGAACTTCCTGGAGACTGGGTTTCAGTGGGTCACAGCACTCAGTGGCTTTGGTACTCTGTATATGCCAGCAAGCAAGTGAGCTGGCGCACAAGGGTCTTGGTGGTATCTGATTGGACAAGAAGATTCATCTTTGGAAGAGATTCAAGTCGTATCTGA 1734 0.4337 MTIGSLFSKAARTFHSYPTSKLLLICTLSGGGVVAYSESQSDSGRPRIEPNERGKKRVVVLGTGWAGTSFLKDLDASIYDVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIIKKRKGEIKFWEAECLKIDAANKKVFCRSNIDANLVGSGEFSLEYDFLVVATGAQVNTFNTPGVKENCHFLKEVEDAQRIRTSVIDCFEKAILPSLTEEERQINLHFVIVGGGPTGVEFAAELHDYVHDDLSKLYPLAKDLVKITMIQSGDHILNTFDERISTFAEQKFGRDGIEVQTGCRVTSVTDKEIKVKIKSTGEVFSIPHGLVVWSTGIGTLPVVRDFMEQINQANRKVLQTDEWLRVIGCEAVYAIGDCASIHQRKIMDDISTIFKAADKDNSGTLTIKEFKDVMDDIILRYPQVELYLKSKHMLDVADLWKDPQGKEREEVDIEGFKSALCQVDSQMKSLPATAQVAAQQGAYLASCFNRLDHCTDNPEGPMRFRESGRHKFRPFRYKHLGQFAPLGGEQAAAELPGDWVSVGHSTQWLWYSVYASKQVSWRTRVLVVSDWTRRFIFGRDSSRI 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0518 577 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 47 407 - -
Lele29g0518 577 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 424 576 - -
Lele29g0518 577 SUPERFAMILY FAD/NAD(P)-binding domain 55 274 IPR036188 -
Lele29g0518 577 PRINTS FAD-dependent pyridine nucleotide reductase signature 58 77 - -
Lele29g0518 577 PRINTS FAD-dependent pyridine nucleotide reductase signature 222 240 - -
Lele29g0518 577 PRINTS FAD-dependent pyridine nucleotide reductase signature 161 179 - -
Lele29g0518 577 SMART efh_1 382 410 IPR002048 GO:0005509
Lele29g0518 577 PANTHER NADH DEHYDROGENASE 51 577 IPR045024 GO:0003954|GO:0006116
Lele29g0518 577 Gene3D - 429 576 - -
Lele29g0518 577 Gene3D - 46 398 - -
Lele29g0518 577 ProSiteProfiles EF-hand calcium-binding domain profile. 378 413 IPR002048 GO:0005509
Lele29g0518 577 SUPERFAMILY EF-hand 335 463 IPR011992 -
Lele29g0518 577 Pfam Pyridine nucleotide-disulphide oxidoreductase 56 378 IPR023753 GO:0016491
Lele29g0518 577 ProSitePatterns EF-hand calcium-binding domain. 391 403 IPR018247 -
Lele29g0518 577 SUPERFAMILY FAD/NAD(P)-binding domain 222 376 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0518 Lele-ChrLele29 3140986 3145047 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0518 5 577 Chloroplast and Mitochondria Gene Families AT4G21490 66.609 0.0 793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0518 29 3140986 3145047 Lele31g1027 31 17256379 17262736 hybridization
Lele29g0518 29 3140986 3145047 Lele32g0496 32 3101763 3105679 hybridization