Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0517 ATGCGTTGGTCTTCTTTCTGCCAGACAGCTTCAAGGGCTTTTCATCAATCTACGTCCTGGTCCAAGGTTCTTGCCGTCTGCACTGTCAGTGGGGCAGGTTTAGTGGGATATGCTGATGCAGGAGCAGTTCAGAGCGAGAATGGTGGGGATAGAAGCCCGAAGAAGAAAAAGGTGGTGGTGGTGGGAACAGGATGGGCTGGGACCAGTTTTGTGAAGAATTTGAAAAACCCTTCGTATGATGTGGAAGTAGTTTCACCTCGTAACTATTTTGCATTTACGCCTTTGCTTCCAAGTGTCACCATCGGCACTGTGGAATCAAGGAGCATTGTTGAACCCATTCGCAAAATCATCAATAAGAAGGACGTAAACGTTCAATTCACACAAGCTGAATGCTTTAAGATCGATGCCAAGAATCGGAAAGTGTACTGTCGTTCTACTGAAGGCAGCAAAAATGGCAAACAAGAATTTTCTATTGATTATGACTACCTCGTTCTAGCCATGGGAGCCCGTTCTAACACATTTAACACCCCAGGTGTTGAAGAGTATACTCACTTCTTGAAGGAAGTGGAAGATGCTCAGAAAATCCGTCGGAAAGTGATTGAACTTTTCGAAAAGGCAAGCCTGCCATGTGTACCTGAAGAGGAGAAGAAGAAACTTCTGCATTTTGTGGTAGTTGGTGGTGGTCCGACTGGTGTAGAGTTTGCTGCAGAACTTCATGACCATGTTCATCAGGATTTATACAAACTATATCCTTCTGCCAAAAACTACGTAAAGGTTACACTTTTGGAAGCAGGCGATCATATTCTGAACATGTTTGACAAGAGGATTACTGAGTTTGCTGAAGAAAAGTTCAAAAGAGAGGGGATCGATGTGAAACTAGGTTCTATGGTTATAAAAGTGGCTGAGAATGAAATCGGTACAAAAGAAAGAGGAACGGGTAAGGTTGGATCTTTACCTTACGGAATGGTGGTTTGGTCAACTGGTATTGGTCCTCGTGCTGAAGCTGTTCAGTTTATGAAAGATATTGGCCAGGGTAATAGGCGTGCCATTAGCACCGATGAATGGTTAAGAGTTGAAGGAGTTGACAACATCTATGCCCTCGGAGATTGTGCCACTAAAAATCAACGTAGAGTTATGGAAGATATAGCAGTGATATTTAGCAAGGCAGACAAGAACAACCTCGGGAAATTGGATCTGGATCATTTTCAAGAGGTTGTTGGAGACATTATTGAGAGGTACCCGCAAGTGGATATTTATCTAAAGAAGAAGCAAATGGGTAGCATAGTGGCACTAATGAAGAACTCTCAAGACAACAATACTCTTGTCGACATTGAAACATTCAAATCTTGTCTCTCTGAAGTAGATTCCCAGATGAAAAATCTTCCTGCAACAGCTCAGGTAGCTGCTCAACAAGGGGAGTATCTTGCAGACTGTTTCAATCGAATGGAGAAGTGTGAGAAATATCCTGAAGGACCCCTTAGGTTTAGAGGAACAGGACGTCATCGTTTTCGTCCCTTCAGGTACAAGCATTTCGGGCAATTTGCTCCGTTAGGAGGAGAACAAGCAGCAGCTCAGCTTCCGGGAGATTGGGTTTCAATCGGACATAGCACACAGTGGCTCTGGTATTCTGTATATGCAAGCAAACAAGTGAGCTGGCGTACCAGGTATTTGGTGGTGGCAGATTGGGGACGACGCGTCATATTCGGCAGGGACTCAAGTGGAATATGA 1728 0.441 MRWSSFCQTASRAFHQSTSWSKVLAVCTVSGAGLVGYADAGAVQSENGGDRSPKKKKVVVVGTGWAGTSFVKNLKNPSYDVEVVSPRNYFAFTPLLPSVTIGTVESRSIVEPIRKIINKKDVNVQFTQAECFKIDAKNRKVYCRSTEGSKNGKQEFSIDYDYLVLAMGARSNTFNTPGVEEYTHFLKEVEDAQKIRRKVIELFEKASLPCVPEEEKKKLLHFVVVGGGPTGVEFAAELHDHVHQDLYKLYPSAKNYVKVTLLEAGDHILNMFDKRITEFAEEKFKREGIDVKLGSMVIKVAENEIGTKERGTGKVGSLPYGMVVWSTGIGPRAEAVQFMKDIGQGNRRAISTDEWLRVEGVDNIYALGDCATKNQRRVMEDIAVIFSKADKNNLGKLDLDHFQEVVGDIIERYPQVDIYLKKKQMGSIVALMKNSQDNNTLVDIETFKSCLSEVDSQMKNLPATAQVAAQQGEYLADCFNRMEKCEKYPEGPLRFRGTGRHRFRPFRYKHFGQFAPLGGEQAAAQLPGDWVSIGHSTQWLWYSVYASKQVSWRTRYLVVADWGRRVIFGRDSSGI 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0517 575 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 423 574 - -
Lele29g0517 575 PRINTS FAD-dependent pyridine nucleotide reductase signature 349 371 - -
Lele29g0517 575 PRINTS FAD-dependent pyridine nucleotide reductase signature 58 77 - -
Lele29g0517 575 PRINTS FAD-dependent pyridine nucleotide reductase signature 221 239 - -
Lele29g0517 575 PRINTS FAD-dependent pyridine nucleotide reductase signature 160 178 - -
Lele29g0517 575 SUPERFAMILY FAD/NAD(P)-binding domain 221 375 IPR036188 -
Lele29g0517 575 Pfam Pyridine nucleotide-disulphide oxidoreductase 56 379 IPR023753 GO:0016491
Lele29g0517 575 PANTHER NADH DEHYDROGENASE 47 574 IPR045024 GO:0003954|GO:0006116
Lele29g0517 575 SUPERFAMILY EF-hand 333 453 IPR011992 -
Lele29g0517 575 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 46 406 - -
Lele29g0517 575 Gene3D - 414 574 - -
Lele29g0517 575 Gene3D - 47 408 - -
Lele29g0517 575 SUPERFAMILY FAD/NAD(P)-binding domain 55 273 IPR036188 -
Lele29g0517 575 ProSiteProfiles EF-hand calcium-binding domain profile. 377 412 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0517 Lele-ChrLele29 3136950 3139833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0517 1 575 Chloroplast and Mitochondria Gene Families AT4G21490 67.642 0.0 792
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0517 29 3136950 3139833 Lele31g1028 31 17264485 17267698 hybridization
Lele29g0517 29 3136950 3139833 Lele32g0495 32 3098140 3100986 hybridization