Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0511 ATGGGAAGAGCACCTTGCTGCGACAAAAATGGCCTCAAGAAAGGTCCCTGGACCCCTGAAGAAGACGCCAAGCTCATTCATCACATTCAAACTCATGGCCCTTGCAATTGGCGCACCCTCCCCAAGAATGCTGGTCTTGAAAGATGTGGCAAGAGTTGCCGACTTCGATGGACTAATTACCTCAGGCCCGACATCAAGAGAGGAAGGTTCTCCTTCGAAGAAGAAGAGATCATTATCCAGCTCCACAGCATAATGGGAAACAAGTGGTCGGCGATAGCGGCTAGATTGCCTGGAAGAACCGACAATGAAATAAAGAACTACTGGAACACCCACATACGAAAGAGGCTTCTTCGAATGGGAATCGACCCTGTTACTCACGCCCCACGCCTCGATCTTCTCGACATATCTTCCATTCTTGGGTTGTTGTTGGGAATGGGAAACACGTCACTCTTGAATCTGCAGGGCTTGTTGGGAGCTCAGGCCTTGTTGAACCCTGAATTGTTAAAGATGGCAACCACCCTGTTATCGCTGAAGAACGAAAACCCAGAACTGGTTTCACTGAATCTTCAGCAAATGATCCAACCTGCAGGCAATTCTCAAGTTCAAGCACAAGCCCCAATCGATCCCGCACTAGCACAGTTCAGTAACCAGTTTCAGAAGCCAATGGAAACCAACAACGTGGAAGGATTCTCGGGGGATTTGACGACCATGGGATTCTCAGATTCCCAAGTTCAATCCTGTATGGCTGGGAAAATTGATCTGTTGCAACAAAACCAAGCTGAATTCCTGGGAGATCCTGGATTCCTGCAAAACATGGGCTATGACTCTGTTTTGTCGACGCCGTCATCGAGTACAACCCCATTGAACTCGTCATCGACGCAAGTGAACAATAGCAGTGTGGAAGAGGAGAGAGATAGCTATTGTAGCGACTTGTTCAAGTTCAAAATTCCAGAGGATTTAGATCTTAGTAGTTACTTGCTGTAA 984 0.4746 MGRAPCCDKNGLKKGPWTPEEDAKLIHHIQTHGPCNWRTLPKNAGLERCGKSCRLRWTNYLRPDIKRGRFSFEEEEIIIQLHSIMGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHAPRLDLLDISSILGLLLGMGNTSLLNLQGLLGAQALLNPELLKMATTLLSLKNENPELVSLNLQQMIQPAGNSQVQAQAPIDPALAQFSNQFQKPMETNNVEGFSGDLTTMGFSDSQVQSCMAGKIDLLQQNQAEFLGDPGFLQNMGYDSVLSTPSSSTTPLNSSSTQVNNSSVEEERDSYCSDLFKFKIPEDLDLSSYLL 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0511 327 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Lele29g0511 327 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele29g0511 327 Gene3D - 69 116 - -
Lele29g0511 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele29g0511 327 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 279 - -
Lele29g0511 327 FunFam MYB-related transcription factor 13 66 - -
Lele29g0511 327 SMART sant 66 114 IPR001005 -
Lele29g0511 327 SMART sant 13 63 IPR001005 -
Lele29g0511 327 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele29g0511 327 Gene3D - 13 66 - -
Lele29g0511 327 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lele29g0511 327 MobiDBLite consensus disorder prediction 279 302 - -
Lele29g0511 327 FunFam Transcription factor MYB39 69 130 - -
Lele29g0511 327 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele29g0511 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele29g0511 327 CDD SANT 16 61 IPR001005 -
Lele29g0511 327 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0511 Lele-ChrLele29 3087905 3089085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0511 1 327 MYB Transcription Factor Family AT4G21440 50.980 2.90e-108 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele29g0511 Myb_DNA-binding 2e-13 CL0123