Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0507 ATGATCATGAGAGGCCCTTACTATGACAAAAATGGAATAAAGAGAGGTGCGTGGAGTAAGGAAGAGGATGAAATGTTGAGAGCATATGTTGAGAGATGCGGCCACAGTAATTGGCGCCAACTCCCCAAACGCGCAGGTTTAACAAGGTGTGGAAAGAGTTGCCGACTTCGATGGCTAAATTACCTTCGCCCGGGCGTAAATCGTGGAAATTTCACCCAAGAAGAAGACCAACTCATCATCAAATTACATCAACAGCGTGGAAATCAGTGGGCTTCGATGGCCAAACTATTACCAGGGAGAAGTGACAACGAGATTAAGAACCGTTGGCATTGTCACCTAAAGAAGCAGTTGGAGTGCAATCATGCGGGAAAATCTGAGTTCAAACCGAAGGCAAGTGGTACTTGTGAAGGAGAAACAACCAAGTCTTTCGGACCTGAAAATCCTCAGCTTGGTCTTGCTTCTGCTTCCTCCAGTGATGTCTCAGAAAGATCACGGCCCAGCTACAATTCATCTTCAACCTTTTCCTTCGGAGGAGAAAGCGTTGCTAATGATGCATGGGAAATCTTTGAAGATCTCGGCGATTTTTGGACCCAGCCATTTCTCCCAGAAAATATATATGACCAGGATAACTGTTACAGTATGAACTATGCAGCAAATTTAGCAGACGTGGATGAATATTCCTCATACATCTTGGATAATGCTGTCGTTTTGCGCCAAGTGATGCAAGAAGATCCTAAAAAGGATATATAA 750 0.4413 MIMRGPYYDKNGIKRGAWSKEEDEMLRAYVERCGHSNWRQLPKRAGLTRCGKSCRLRWLNYLRPGVNRGNFTQEEDQLIIKLHQQRGNQWASMAKLLPGRSDNEIKNRWHCHLKKQLECNHAGKSEFKPKASGTCEGETTKSFGPENPQLGLASASSSDVSERSRPSYNSSSTFSFGGESVANDAWEIFEDLGDFWTQPFLPENIYDQDNCYSMNYAANLADVDEYSSYILDNAVVLRQVMQEDPKKDI 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0507 249 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Lele29g0507 249 FunFam Transcription factor RAX3 8 68 - -
Lele29g0507 249 MobiDBLite consensus disorder prediction 127 174 - -
Lele29g0507 249 Gene3D - 69 139 - -
Lele29g0507 249 Pfam Myb-like DNA-binding domain 68 110 IPR001005 -
Lele29g0507 249 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Lele29g0507 249 SMART sant 14 64 IPR001005 -
Lele29g0507 249 SMART sant 67 115 IPR001005 -
Lele29g0507 249 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 4 174 - -
Lele29g0507 249 CDD SANT 17 62 IPR001005 -
Lele29g0507 249 Gene3D - 15 67 - -
Lele29g0507 249 CDD SANT 70 113 IPR001005 -
Lele29g0507 249 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Lele29g0507 249 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Lele29g0507 249 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Lele29g0507 249 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Lele29g0507 249 MobiDBLite consensus disorder prediction 135 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0507 Lele-ChrLele29 3062522 3063794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0507 4 120 MYB Transcription Factor Family AT2G31180 62.393 2.13e-51 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele29g0507 Myb_DNA-binding 1.4e-14 CL0123