Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0506 ATGTTGAGAGACACGGCCACGCTAATTGGCGTCAACTCCCCAATCACGCAGAAGCACAAGTTAGGATGGATTTTGATGGAGTTTCACCTTCATTTTACAGGTTTATCGAGATGGTCTTTGATTGCCGAAAGATTACCGGGGAGAAGTGACAACGAGATTAAGAACCATTGGCATAGCCGCCTAAAGAAGCAGTTGGAGTGCAATCACGGAGGAAAATCTGAGTTCAAAATGAAACCTAGTGCTACTTGTGAAGGAGAAACAACAAAGTATTTCGAACTTGAAAGCCCTTTGCCTGCTTCCTCCAGCAATATCTCAGAAAGCTCACCACCCAGATACACTTCATCTCCAACCCTTTCCTTCGGAGGAGATCAAAGCGTTGCTGATGCTGCATGGGAAATATTTGAAGAATTCGGAGATTTTTGGAGCCAACCATTTATCCCAGAAAATGCATACGACCAGGATGACTACTATTATTATAGTCTGAACTACGCAGACCTGGACGAATATTCCTCAATCCTCATTGATAATGCTGAGTTTTTGAGCTGTGTCATGCAAGAATTTCCGGAAGATCCTTCAAAGGATATATAA 588 0.4286 MLRDTATLIGVNSPITQKHKLGWILMEFHLHFTGLSRWSLIAERLPGRSDNEIKNHWHSRLKKQLECNHGGKSEFKMKPSATCEGETTKYFELESPLPASSSNISESSPPRYTSSPTLSFGGDQSVADAAWEIFEEFGDFWSQPFIPENAYDQDDYYYYSLNYADLDEYSSILIDNAEFLSCVMQEFPEDPSKDI 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0506 195 CDD SANT 34 61 IPR001005 -
Lele29g0506 195 PANTHER MYB DOMAIN PROTEIN 55 30 106 - -
Lele29g0506 195 ProSiteProfiles Myb-like domain profile. 34 61 IPR001005 -
Lele29g0506 195 Gene3D - 22 88 - -
Lele29g0506 195 MobiDBLite consensus disorder prediction 97 118 - -
Lele29g0506 195 Pfam Myb-like DNA-binding domain 34 59 IPR001005 -
Lele29g0506 195 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 37 65 IPR017930 -
Lele29g0506 195 SUPERFAMILY Homeodomain-like 29 69 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0506 Lele-ChrLele29 3057554 3058845 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0506 30 160 MYB Transcription Factor Family AT3G23250 35.065 4.31e-13 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele29g0506 Myb_DNA-binding 2.2e-07 CL0123