Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0505 ATGGTGAGAGGTCCTTTCTTCGACGCAAATGGAGTTAAGAAAGGAGCATGGAGTGAAGAAGAAGACCAGAAGCTTATATCTTATATTCAGACCCATGGCCATCCTAATTGGCGCCAACTCCCCAAGTTAGCAGGCTTGGCGAGATGTGGAAAGAGCTGCAGGCTTCGATGGATGAACTACCTGCGACCAAATCTGAAACGCGGGAACTATACTCCACAAGAGGAGGAAATCATCCTCAAACTACACGAACAACATGGGAATAAGTGGTCGTTGATTTCAGAGAAGTTACCTGGAAGAACAGACAACCATATAAAGAATCATTGGCATAGCCAACTGAAGAGGCGATCGAGGGACAGAGGAAGGAGTGATTCTCAGGTGAAAGGGAAGAAGTCAGGTCGTAACTGTAATACGACTGAGCAATCGGAATATGATGTTGTGAAAGTTGTGAATGAGTTGAATAATATATTTGAAAGCTCATCACTGGACTGGACGGAAACGACGTCGTCGACCCAGGCTGAGCAAGACTACTCTGCTTCCGTGCTTTCTATTGATACAGAATCTACCACGAAGAATTCGCCAGAAGAATATAATAGCGTGGCTTCGTGGGAAGTCAATAAATTCCAAGAATATAGTGGCGATTTTTGGACCGAACCGTTTATATCAGAAGATATTTACAGTGAATATTGCTATCCAAATATAGGAGGTGGCGGTGCCGCCGCCGGAGACATATATTCATATGATGGCGCGGTCTTGTTTTTCTAA 762 0.4436 MVRGPFFDANGVKKGAWSEEEDQKLISYIQTHGHPNWRQLPKLAGLARCGKSCRLRWMNYLRPNLKRGNYTPQEEEIILKLHEQHGNKWSLISEKLPGRTDNHIKNHWHSQLKRRSRDRGRSDSQVKGKKSGRNCNTTEQSEYDVVKVVNELNNIFESSSLDWTETTSSTQAEQDYSASVLSIDTESTTKNSPEEYNSVASWEVNKFQEYSGDFWTEPFISEDIYSEYCYPNIGGGGAAAGDIYSYDGAVLFF 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0505 253 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele29g0505 253 Gene3D - 68 143 - -
Lele29g0505 253 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele29g0505 253 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 193 - -
Lele29g0505 253 FunFam MYB-related transcription factor 13 66 - -
Lele29g0505 253 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele29g0505 253 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lele29g0505 253 CDD SANT 69 109 IPR001005 -
Lele29g0505 253 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele29g0505 253 SMART sant 66 114 IPR001005 -
Lele29g0505 253 SMART sant 13 63 IPR001005 -
Lele29g0505 253 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Lele29g0505 253 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele29g0505 253 CDD SANT 16 61 IPR001005 -
Lele29g0505 253 MobiDBLite consensus disorder prediction 100 137 - -
Lele29g0505 253 Gene3D - 7 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0505 Lele-ChrLele29 3052575 3053522 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0505 1 201 MYB Transcription Factor Family AT2G31180 44.279 2.36e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele29g0505 Myb_DNA-binding 7.6e-15 CL0123